| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38092 |
|---|
| Symbol | |
|---|
| ID | 5004227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | - |
|---|
| Start bp | 136203 |
|---|
| End bp | 136841 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640419648 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420091 |
|---|
| Protein GI | 145351452 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00931034 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTGG TGTCGTCCTC GGACAGACCG TGCTCGAGCG CGAGCCGCGT CACGGGCGAA
ACGGACGTGC ACGCGGCGAA GTGGATTAAA CTCGTGCGGC TAGATTACGT CGACCCGACC
GGCGCGGCGA GAACCTGGGA CGCGGTGCGA CGAACGACGA CGACGAAAGA AGCGGAAGCG
GACGCGGTGT GCGTGTTCGC GACCTTACGA GGCGGTGATG CGAAGGAGGA TGAGGTGCTC
TTAGTGAGAC AGTTTCGACC GGCGTGCGGG ACGGAGACGA TCGAGTTGCC GGCGGGACTG
ATCGATGACG GCGAAAAGGC CGAGACGAGC GCGCTGAGAG AATTACACGA GGAGTGTGGG
TACGTCGGGC GAGTGACGAA CGTGACGCCG GCGGTCGTGC TGTCGCCCGG GTTGTCGGAC
GAATCGGTGG TCTTGGTGAC CGTGGACGTC GATTTGGACG CGGCGGAAAA CGCGAATCCG
TCGCAGCGAT TGGAGGGCTC GGAGTTTATC ACGGTGATTC GATGTCCAAA GAAGGATTTG
TTGCGAACGC TCGATGAGTT CAGCGCGCAA GGGATCAAAG TCTTCGCTGG ATTGTACACG
CTAGCTTGGG CGCTCGAAAA CGCGAAGAAT TTGCAATGA
|
|---|
| Protein sequence | MPVVSSSDRP CSSASRVTGE TDVHAAKWIK LVRLDYVDPT GAARTWDAVR RTTTTKEAEA
DAVCVFATLR GGDAKEDEVL LVRQFRPACG TETIELPAGL IDDGEKAETS ALRELHEECG
YVGRVTNVTP AVVLSPGLSD ESVVLVTVDV DLDAAENANP SQRLEGSEFI TVIRCPKKDL
LRTLDEFSAQ GIKVFAGLYT LAWALENAKN LQ
|
|---|
| |