| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38040 |
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| Symbol | |
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| ID | 5004062 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009364 |
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| Strand | - |
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| Start bp | 192915 |
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| End bp | 194288 |
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| Gene Length | 1374 bp |
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| Protein Length | 437 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | 640419483 |
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| Product | predicted protein |
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| Protein accession | XP_001420108 |
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| Protein GI | 145351488 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.990763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00560331 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGAAGT ATCCTCGCTG GCTCGAGATT ACGGCGTTCC TGTTCAACGC GTTGACGCCG
ATGGTGATGG TGTTCTATGC GTGGCTTATT TACGAAGGCA CGTACAAGGA TAGCTCGGAA
GACATGTTCG GTAACATGAC TACGCGTAAC TACGACTCGA ACGTTCGCCA AGGGATGACG
TTGAAGGACA TCACCGGCAT CGACAACGTC AAGGCGGAAA TGTTTGAACT CATTTCCTAC
TTGAAGGATT TCGAAAAGTA CAACTCCATG GGCGCGCGCA TTCCCGCAGG CGTGCTTTTG
TGCGGTCCGC CCGGTACGGG TAAGACGTTG CTCGCTCGTT GTGTCGCGGG CGAGGCAAAT
GTGCCCTTCT TCTCATGCGC TGGTACGGAG TTTATGGAGA TGTTCGTCGG CGTCGGAGCC
GCGCGTATTC GCAACTTGTT TGATCAAGCC AAGAAGGTTG CGCCGTGCAT CATCTTCATC
GATGAATTCG ATGCCGTCGG CACGAAGCGT ACTGAGACAC AATCCGGTCA GGTTTACGGT
AACGACGAAG CGACGGCGAC GATCAATCAA ATGCTGACGG AGATGGACGG TTTCTCGACC
GCCACGGGCA TCATGGTGTT GGCGGCGACG AACCGTCCGC AAGTACTCGA TCCTGCGCTC
ATTCGTGCCG GTCGTTTTGA TCGCATCATC GAGATGGGTC TGCCGAACAA GAAGTCGCGT
CAAGAAATCT TGTTCTTGCA CTGCAACAAG CCATCGTTCG CGTCGAGTGT CGATCCCAAC
TTGGACTACG AGTACCTCGC CAGACAAACT GCCGGTTTCA GCGGCGCCGA CATCGAGAAC
CTCACCAAGT CGGCCGTCAT GCGCTGTGCG CAAGGCGAGA AGGCGCTCGC GTCTACGGGT
GACTTCTTGT TTTGCATCGA CGATATTCGA CGATCGCAAG CGTTCGTTCG CAACGGAAGT
GGCAGCGGAA GTTTGGCTCG CGATAGAATG CTCGAAGATA CCCTCATCGC GCAACTCGAC
GCGTACGAAC GAGACTCGGT GGTGAATTAT TACGCCGCGC AGGCCGTGGT CGCGATGCAC
ATGCCTTCGT ACGACGAGAT TAGCAAGGTG ACGGTGTTTA ACGGTGGTGT AGCCACGGGT
CAAATCGTCT ACGTGCCGGA TGAAGTCGAC TCTCCCGCGG CTCGCACGGT GCGCTCCATG
GAGTATTACG AAGCCAAGCT GTGCGTACTC CTCGCAGGCC AGATGGCGGA GCGTTATTTG
TACGGTCCCG AGAACGTAAC GACCCGCGGC ATGCACGATG TCGCCGCTGC GACGAATTTG
GCGTGCGAAA TGGTGATGCA GAACGGGTGG AGTGATTTAG GTCCCATCGC CCTC
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| Protein sequence | MEKYPRWLEI TAFLFNALTP MVMVFYAWLI YEGTYKDSSE DMFGNMTTRN YDSNVRQGMT
LKDITGIDNV KAEMFELISY LKDFEKYNSM GARIPAGVLL CGPPGTGKTL LARCVAGEAN
VPFFSCAGTE FMEMFVGVGA ARIRNLFDQA KKVAPCIIFI DEFDAVGTKR TETQSGQVYG
NDEATATINQ MLTEMDGFST ATGIMVLAAT NRPQVLDPAL IRAGRFDRII EMGLPNKKSR
QEILFLHCNK PSFASSVDPN LDYEYLARQT AGFSGADIEN LTKSAVMRCA QGEKALASTG
DFFLARDRML EDTLIAQLDA YERDSVVNYY AAQAVVAMHM PSYDEISKVT VFNGGVATGQ
IVYVPDEVDS PAARTVRSME YYEAKLCVLL AGQMAERYLY GPENVTTRGM HDVAAATNLA
CEMVMQNGWS DLGPIAL
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