Gene OSTLU_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_1860 
Symbol 
ID5004109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp502737 
End bp504044 
Gene Length1308 bp 
Protein Length436 aa 
Translation table 
GC content54% 
IMG OID640419530 
Productpredicted protein 
Protein accessionXP_001420019 
Protein GI145351297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.846713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTCCGAGACG AAGTCAAAGA AATGTTCACC GACACGCTCG AGTCGTACAA CGTCCACGCC 
TACCCCGCGG ATGAGCTGAA GCCGATGTCT TGCGAGGGTG TAAACACGTT CGGCAGCGAA
TCGGGGTTCG CGGTGACGCT CATCGACGCG TTAGACGCGA TGGTGGTGAT GGGGAACAAG
ACGGCGTTCG AGCGCGGCGT TCGAGCGGTG ATCGATAACA CGAGATTCGA CGTAGACGCG
CACGTGAGCT TGTTTGAGAT GAATATTAGA GTCCTCGGCG GACTACTGAG CGCGCATTTG
CTGGCGAGCG ATGAGGCGAC GGGGTTTGGG ATTGAGTGGT ACGAGGACGA GTTGCTGGAG
CTGGCGAACG ATTTGGGTGA GGCGTTTCTT CCAGCGTTTG AGACGAAGAC GGGCATACCG
TATGGTGCGG TGAATTTGAA GTACGGTGTA GAAGTGAATG AGACGACCAT TACGAGCACT
GCTGCGGGAG GCTCGTTGAT TTTAGAGTTT GGGACGTTGA GCGCGTTAAC GGGGGATCCG
CGATTTAGGC GGGTCGCCGA AGCCGCGTTG GAAGCGTTGT GGGATCACAG GAGTGACATA
GGCTTAGTAG GTGCACATAT TGATATCGAA ACCGGACAGT GGACGCAAGC CGAGGCGAGC
GTCGGGGCCG GAATCGACTC ATTTTACGAG TACATGTTGA AGTCATACAT TTTGTTTGGT
AACGAAAGGC ATTTGGAAAT ATTTGAAGAA GCGTACGCAG CGGTAGAGGC ACACGTGCGG
TTAGCACCGT GGTACGTCGA GGCCGGTATG ATGACTGGAC AGTTGATTAG CTCACGATAT
GACTCGTTGA TGTCGTTCTG GCCCGGCTTA CAGGCGCTGT ATGGTGACAT CGAAACCGCG
ACGACGACGC ACGACGCGTT TTTCCAGGTG TGGAAACATT ACGGTTTCAC ACCTGAAGGC
TTTGACGTGC GGACGGGGGC GGCGATTCCA GGGCAAAAGC CGTATCCTCT GCGCCCAGAG
CTCATCGAAA GCACGTATTT ATTGTACAAG GCCACGGGCG ACGTGACGTA CATCGCCTGT
GGTCGTGATT TTTTGGCGAG TTTGCGTTTG CTCAAGACGA ATTGCGGTTA CGCTCACATG
GCGGACGTTT CGACGCAAAA GCTCGTGGAC AAAATGGAAA GTTTCTTCTT ATCGGAGACG
TTGAAGTACT TATATTTACT CTTCGACGCG GCTTTAGATC GGGAGAACAT CGTGGATGGC
GGGCCGTATC CATATTTGTT CACCACAGAG GCGCACATTT TACCGCTC
 
Protein sequence
LRDEVKEMFT DTLESYNVHA YPADELKPMS CEGVNTFGSE SGFAVTLIDA LDAMVVMGNK 
TAFERGVRAV IDNTRFDVDA HVSLFEMNIR VLGGLLSAHL LASDEATGFG IEWYEDELLE
LANDLGEAFL PAFETKTGIP YGAVNLKYGV EVNETTITST AAGGSLILEF GTLSALTGDP
RFRRVAEAAL EALWDHRSDI GLVGAHIDIE TGQWTQAEAS VGAGIDSFYE YMLKSYILFG
NERHLEIFEE AYAAVEAHVR LAPWYVEAGM MTGQLISSRY DSLMSFWPGL QALYGDIETA
TTTHDAFFQV WKHYGFTPEG FDVRTGAAIP GQKPYPLRPE LIESTYLLYK ATGDVTYIAC
GRDFLASLRL LKTNCGYAHM ADVSTQKLVD KMESFFLSET LKYLYLLFDA ALDRENIVDG
GPYPYLFTTE AHILPL