Gene OSTLU_17170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17170 
Symbol 
ID5003932 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp543042 
End bp548094 
Gene Length5053 bp 
Protein Length499 aa 
Translation table 
GC content61% 
IMG OID640419353 
Productpredicted protein 
Protein accessionXP_001420207 
Protein GI145351703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.177253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA AACAACCGGT GGCGATGGCG AACACATCGT TTCCCGCGAA AATACCGTTC 
ACGCTCCCGG CGGCGAAACG AACGGCGACG GTGACGGCGC GAGACAACAG CGAAAATGTC
TAACAGTAAT GGGCGGCGAG CTTTGTTGTA AAATCAAGCG GTTCATTCTT TCATCTAAGC
TATGCTATAC CTGCTAGTTC ATCATCCGAA TGCTCGTCTA CTTCGTCGCT ATCTTCGTAA
GCGAGTAAAT TCCGTTCAAT GTCGACTAAA TTCATGATGG TCATCCCCGC TCGCCCGCTC
CGCTCGCACC ACTCGGCTTG CTCGTCCGCG AATCGACGCA CGCCGCGGCT GGAGCCCAAG
TTCACGCCGA TGCTTTCGAG TAAACCGGGC AAATCACCCA ACGTGGTAAC GCTCACGAGC
TGGCCGCGAA GCGCTAGACC TACCATGGAC TTCAATGGTT CGCAACACTC GCGCGGCAAG
GCTGCTTCGT CGCTCAGCCG ACAGTGTTCG CGAGCGTCGA GCTTCTTCTG AACGTCGGCG
TCGTCGACGG GAACCCATCG ATTCGTCGTC GAGCACCGCA GCTCGCTCGG CGCGTAGTCC
GCTTTATATT TCATCTTTTG ACAATCGTGA ATGTAATACC CCATGTAGTA GAACTCAAAC
TCTCGCGTCG CCTCTGGCCG TCGACGTCGC TCGTCCGCGA CGAACTCAAT TTCTTTCAGC
GCGCTGACTT TGCCCAGACT CAACTTCGCG TACTCGGGGT CCCAGAAAAA GTACTTCGAA
CTCAAACCTT TCGGCAAAAT GTCGACCACA CCCACGGCGA CGAGCTTCCC ATCGATCCTG
TACTGCTGAT GAAACGCGCC GAGTCCGATG CTCGGCGCAG ACGTCTCGTT CGGCGTCTCG
TCCTCGACGA ATGGCGAGTC CACTAAAAAT CTTCTAAAAC TCGCTTCCTT GAGTTCCGAC
GCCTCGTCTC CGTGCACGGC GGCTTGATAC CTTTTCCACA ATTCAAATTC CTCGCGCACG
AACGTCGAAC GCGCCGTCGT TATCTCCAAC TTTCGCGCCG CTCGCGCGCC GTCCTCGTCG
CCGCCGTCGC TTCCCTCATC TCTCTCGCGC CGCAGATACG CGTCCAATCT GCGCAGCACC
TGCCGCTGCT TTTTGGACGG CCTGAACGCG TCCACGCTGA CGCGAATCGT GTGCTGCGCG
CAGCACGAGA CGTCGATCGC GGGCTTGTAA ATCCACGTTC CGCTGCGTCT CCAGCCGTCG
TCAATCAATT CGCCGTACCT CTTCGTCGAC AGCCCGTGCG CGACGGCGCC GTCGCTCACG
GACGCGTCGG GCGACGCGCA GTACCCGCAG TCGCTGACGT TTCGCCCGAC GTAGGACACG
GCGTCGGGAA CGCGAGGCAT TCCCGCGCGT CGCCGCGTGA AGTCGCGCCG CGGGTGGACA
AAAGTCTTCT TTGTGCGTTA CATACAAAAA TCAAGGCGTC GCGATTAGAC GTCGTTCGAG
GACGACTTTC CATAAATCCT TGGTCCGCAG ACTTTGAGTA GAACAATTTG CGTTACAAAA
CAAAACTGTA CTCGGCTGAT GCTATGTTTA CTTTTGTCAA CAAAGGTCAA AACGGCCACG
TCCTCGCGGC GCGCGTCGTG TTGAACAAGA GGGACGTCGA CGTACGATGT TCAGAGTCTG
TTTTCCCGGG AGAAAACAGA CGAGCTCCCG CCGCCTAGCT TAGGGTAGAG TTCCCAACGC
GAAAGTCGTT GTGTACTCGC CAGATCGTCT CTCCCAGAAG GTTACCGACG CTCAAAACCG
TGAGCTGCGG GAAATCGCGC TCCGGCGTGT GCGGAATGGA ATTCGTGACG ATGACTTCGG
TGAACGCACT GTTGGAAAGT CGATCAACAG CGGGTGGGGA AAACACCGCG TGCGTCGCGC
ACGCGTAGAC CTCACGCGCG CCACGTTCGC GCAACAGCTC GGCGCCCGCG AGCAAGGTAC
CTCCGGTGTC AATCATGTCG TCGAGGAGCA CGGCGATTTT GCCATCGACT TCGCCAATCA
AGTTCATCAC TTGTGCCTTG TTATGACCGG TGCGTCGCTT ATCGATGATG GCCAACGGCG
CATCGTTGAG CTTTTTCGCG AACGCGCGAG CGCGCGGGAC GCCACCGACA TCCGGAGAGA
CGATGACGAT GTCGTCTGGA TGAAAGTCCT TCGACGTGAG ATAGTCCAAG ATGACCGACT
CGCCGTAAAT GTGATCGACG GGAATGTCGT AGTACCCGAT CGTTTGCAAC GAGTGAATAT
CCATCAACAC GCATCGCGTC GCGCCCGCCT CGGTGAGCAA GTTGGCGACG AGCTTAGCGG
CGATGGATTC GCGTCCAGAC GTCCTTCGGT CGGCGCGCGC GTAACCAAAG TACGGAATCA
CAGTCGTGAT CGATCGGCAA GACGCGCGTC TGCACGCATC AATCATCACC AACAACTCCA
TCAAGCTGTC GTTCGTCGGC GGACACGTGG GCTGGACGAT GAAGACGTCG CAACCGCGAA
TCGACTCTTT TATTTGAACG TAAATCTCCC CGTCGGCGAA ACGCTTAATC GTCGACTTCC
CGAGCTCTAT CCCTAAATAA TTCGCAATCT CCTCACTCAG CGACGTGTGC GCCGTTCCCG
AAAACACCTT CAACCGACGG CGCAGCACCG CCTCACCGCC TTGATCTTCG TGCTCGTCGT
CGCGCGCGCC GAACCTCGAG TTCGCCATCT CGTTAAACAC CCCCGACGTC GCTCCCGGTC
GGAAGTTTCC TCGCGAGAAC ACGTCTTCGC CCGCCGCGGC GCGCACCACC GTCCGCACCT
GTTCGATTCC GCGCGTCGTC AGTCTCCGCG ATCTCTTTTT CGTCGACGCG TCCCGTCCCG
CGCGTTCAAA CGCCTCGCGC GTCGTCCGCG ATCGCCGTTT CCGCGCCGCC GCGTCCGCGC
GCGCCGTCCT CGGCGTCCGC GTTCGAGCGC GTCGATCGTT CGCGCGTCTT TTTCCCTCCT
CCCTCGCGCG CGTCCGCGCG CGTCGTCGAC GCGCGCGTCC TCGAAGCGTC TCGCGCGTTC
AAACGCACCG CTCGCGCGCC GCCGCGTCGC GTCGTCGTCG TCGTCGCGCG CGTCGCCGAC
GCCGCGCGCG TCGCGCGCGC GCGCGGCGCG ACGCCGCGGA TCGCGCGCGC CATCGGCGCC
GTCGTCGCCA TCGCGCGACG GCGTGTGCGG CGCCGCGCCA TCGCGCGCGA CGCATTGGCT
CCGGGACATT GCCGTCTCAC TGTTTGCCCA TACAAAAGTG CCGAGAAAGT GACGAGAGGG
TTTGCGCGCG CGCGCGACGC GAGAGCTCGA CGCGCGCGAC GCGACGGCGG CGCGCGCGCG
CGGAACGACG TCGATGACGG TCGCGTCCCC GGTCGCGTCG CGCGCGGCGC GATCGCGCGC
GGCGAGCGCG TCGACGACGC GACGACGAGG ACGACGCCCG GGGACGGGGA CGCGCGAGGG
CGCGCGACGC GAGGGCGCGC GACGCGCGCG CGCGGCGAGC GTGCGCGTGG AGAACGACGA
GGGAAAGGCG GACATCGAGA TCACGCCGGA GACGAGGTTC GAGGCGGTGA TCGGGATCGA
GACGCACGTG CAGCTGAACT CGAGGACGAA GGCGTTTTGT CGGTGCGCGT ACGAGTACGG
CGCGGAACCG AACACGAGGG TGTGTCCGAC GTGCATGGGA CATCCGGGGA CGCTTCCGGT
GCTGAACTCG GCGGTGGTGA AGAAGGGGAT CGCGATCGGG ACCGCGCTCG GGGCGAAGAT
ACGAAGGACG AGCAAGTTCG ATCGTAAGCA GTACTTTTAC CCGGATTTGC CGAAAGGGTA
TCAGATTTCG CAGTTTGACG AGCCGCTGTG TTACGACGGA TCCATCGACG TGGTTTTACC
AGTGGAAGAC GGCGGAGAGG TGAAGCGGGT GGGGATCACG CGCGCGCACT TGGAGGAAGA
TGCGGGAAAA TTGACGCACG CGAAGGGCGA GGATGGGAAA AAGTACTCGT ACGCCGACTT
TAATCGAGCG GGCGTGGCGC TGCTGGAGAT CGTCACCGAG CCCGATTTGC GCACAGGACG
CGAGGTCGCG GCGTACGGTT CGGAATTGCG ACGAATAGTG CGGTTTTTGG ATGCGTGCGA
CGGGGACATG TCCCGAGGGT CAATGCGAAA CGACGTCAAC GTGAGCATCC GACCGGTGGG
TCGCGAGCGA TTCGGCACCA AAGTCGAGGT GAAGAACATG AACTCGTTCA ACGCGATGGC
GCGCGCGATC GACTACGAGA TCGCGCGCCA AGAGGAGCTC ATTCGATCAG GGCGAGGCGA
TGAAATCGTG CAAGAGACGC GCACGTGGGA CGAGGCCGCG CAGAAAACCG TCGCCATGCG
CAAGAAGGAA GGCTTGGCGG ATTATCGCTA CTTCCCAGAA CCGGACATCC CCAAGCTGAG
GCTATCGGAA GAGTTCATCT CGAACGTCGT GGCGTCCATG CCCGAGCTGC CGTCGATGGT
TCGCGCGCGA TACGCCGCGC TCGGCTTGCC GCCCGCCGAC GTGCAAGTGC TCGTCGAGGA
CAAAGAGCTC GTGACGTATT TCGACGCCGC GCTGAGCTCG AGCGCGAAAC CATCGGCGAA
ACAAGTCGCC AACTGGCTCA CGGGAGACAT CATGGCCCAC CTGAAGAACT CAAAGATGGA
AAATGTTTCC CAGCTCCCGC TCTCGCCCGA GGCGCTCGGC GAGTTTTGCG CCATGATCGA
CGCCGGAGAA ATCAGCGGTA AAATCGGCAA AGATCTCCTC CCCGAGCTCT TAGAAAAAGG
CGGAAGCGCG AAAAAACTCG TCGCCGACCG CGGCTTGTCC CAAGTTTCCG ACCCGCGCGA
GATCGAAGCC TTGGTTGACG GCGTCCTCGA AGCCAACGCC GGGCAGCTCG AGCAGTATCG
CGCCGGCAAA ACCAAGCTCA AGGGTTTCTT CGTCGGCGCG TGTCTCAAGG CCAGCGGCGG
TCGCGCCAAT CCATCTCTCG TCGATCGCAT CTTACAAGCC AAGCTCGACG GCGTTCCGAT
CGACGTCGCG TGA
 
Protein sequence
MTTKQPTRFE AVIGIETHVQ LNSRTKAFCR CAYEYGAEPN TRVCPTCMGH PGTLPVLNSA 
VVKKGIAIGT ALGAKIRRTS KFDRKQYFYP DLPKGYQISQ FDEPLCYDGS IDVVLPVEDG
GEVKRVGITR AHLEEDAGKL THAKGEDGKK YSYADFNRAG VALLEIVTEP DLRTGREVAA
YGSELRRIVR FLDACDGDMS RGSMRNDVNV SIRPVGRERF GTKVEVKNMN SFNAMARAID
YEIARQEELI RSGRGDEIVQ ETRTWDEAAQ KTVAMRKKEG LADYRYFPEP DIPKLRLSEE
FISNVVASMP ELPSMVRARY AALGLPPADV QVLVEDKELV TYFDAALSSS AKPSAKQVAN
WLTGDIMAHL KNSKMENVSQ LPLSPEALGE FCAMIDAGEI SGKIGKDLLP ELLEKGGSAK
KLVADRGLSQ VSDPREIEAL VDGVLEANAG QLEQYRAGKT KLKGFFVGAC LKASGGRANP
SLVDRILQAK LDGVPIDVA