Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_17170 |
Symbol | |
ID | 5003932 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | - |
Start bp | 543042 |
End bp | 548094 |
Gene Length | 5053 bp |
Protein Length | 499 aa |
Translation table | |
GC content | 61% |
IMG OID | 640419353 |
Product | predicted protein |
Protein accession | XP_001420207 |
Protein GI | 145351703 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.177253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACGA AACAACCGGT GGCGATGGCG AACACATCGT TTCCCGCGAA AATACCGTTC ACGCTCCCGG CGGCGAAACG AACGGCGACG GTGACGGCGC GAGACAACAG CGAAAATGTC TAACAGTAAT GGGCGGCGAG CTTTGTTGTA AAATCAAGCG GTTCATTCTT TCATCTAAGC TATGCTATAC CTGCTAGTTC ATCATCCGAA TGCTCGTCTA CTTCGTCGCT ATCTTCGTAA GCGAGTAAAT TCCGTTCAAT GTCGACTAAA TTCATGATGG TCATCCCCGC TCGCCCGCTC CGCTCGCACC ACTCGGCTTG CTCGTCCGCG AATCGACGCA CGCCGCGGCT GGAGCCCAAG TTCACGCCGA TGCTTTCGAG TAAACCGGGC AAATCACCCA ACGTGGTAAC GCTCACGAGC TGGCCGCGAA GCGCTAGACC TACCATGGAC TTCAATGGTT CGCAACACTC GCGCGGCAAG GCTGCTTCGT CGCTCAGCCG ACAGTGTTCG CGAGCGTCGA GCTTCTTCTG AACGTCGGCG TCGTCGACGG GAACCCATCG ATTCGTCGTC GAGCACCGCA GCTCGCTCGG CGCGTAGTCC GCTTTATATT TCATCTTTTG ACAATCGTGA ATGTAATACC CCATGTAGTA GAACTCAAAC TCTCGCGTCG CCTCTGGCCG TCGACGTCGC TCGTCCGCGA CGAACTCAAT TTCTTTCAGC GCGCTGACTT TGCCCAGACT CAACTTCGCG TACTCGGGGT CCCAGAAAAA GTACTTCGAA CTCAAACCTT TCGGCAAAAT GTCGACCACA CCCACGGCGA CGAGCTTCCC ATCGATCCTG TACTGCTGAT GAAACGCGCC GAGTCCGATG CTCGGCGCAG ACGTCTCGTT CGGCGTCTCG TCCTCGACGA ATGGCGAGTC CACTAAAAAT CTTCTAAAAC TCGCTTCCTT GAGTTCCGAC GCCTCGTCTC CGTGCACGGC GGCTTGATAC CTTTTCCACA ATTCAAATTC CTCGCGCACG AACGTCGAAC GCGCCGTCGT TATCTCCAAC TTTCGCGCCG CTCGCGCGCC GTCCTCGTCG CCGCCGTCGC TTCCCTCATC TCTCTCGCGC CGCAGATACG CGTCCAATCT GCGCAGCACC TGCCGCTGCT TTTTGGACGG CCTGAACGCG TCCACGCTGA CGCGAATCGT GTGCTGCGCG CAGCACGAGA CGTCGATCGC GGGCTTGTAA ATCCACGTTC CGCTGCGTCT CCAGCCGTCG TCAATCAATT CGCCGTACCT CTTCGTCGAC AGCCCGTGCG CGACGGCGCC GTCGCTCACG GACGCGTCGG GCGACGCGCA GTACCCGCAG TCGCTGACGT TTCGCCCGAC GTAGGACACG GCGTCGGGAA CGCGAGGCAT TCCCGCGCGT CGCCGCGTGA AGTCGCGCCG CGGGTGGACA AAAGTCTTCT TTGTGCGTTA CATACAAAAA TCAAGGCGTC GCGATTAGAC GTCGTTCGAG GACGACTTTC CATAAATCCT TGGTCCGCAG ACTTTGAGTA GAACAATTTG CGTTACAAAA CAAAACTGTA CTCGGCTGAT GCTATGTTTA CTTTTGTCAA CAAAGGTCAA AACGGCCACG TCCTCGCGGC GCGCGTCGTG TTGAACAAGA GGGACGTCGA CGTACGATGT TCAGAGTCTG TTTTCCCGGG AGAAAACAGA CGAGCTCCCG CCGCCTAGCT TAGGGTAGAG TTCCCAACGC GAAAGTCGTT GTGTACTCGC CAGATCGTCT CTCCCAGAAG GTTACCGACG CTCAAAACCG TGAGCTGCGG GAAATCGCGC TCCGGCGTGT GCGGAATGGA ATTCGTGACG ATGACTTCGG TGAACGCACT GTTGGAAAGT CGATCAACAG CGGGTGGGGA AAACACCGCG TGCGTCGCGC ACGCGTAGAC CTCACGCGCG CCACGTTCGC GCAACAGCTC GGCGCCCGCG AGCAAGGTAC CTCCGGTGTC AATCATGTCG TCGAGGAGCA CGGCGATTTT GCCATCGACT TCGCCAATCA AGTTCATCAC TTGTGCCTTG TTATGACCGG TGCGTCGCTT ATCGATGATG GCCAACGGCG CATCGTTGAG CTTTTTCGCG AACGCGCGAG CGCGCGGGAC GCCACCGACA TCCGGAGAGA CGATGACGAT GTCGTCTGGA TGAAAGTCCT TCGACGTGAG ATAGTCCAAG ATGACCGACT CGCCGTAAAT GTGATCGACG GGAATGTCGT AGTACCCGAT CGTTTGCAAC GAGTGAATAT CCATCAACAC GCATCGCGTC GCGCCCGCCT CGGTGAGCAA GTTGGCGACG AGCTTAGCGG CGATGGATTC GCGTCCAGAC GTCCTTCGGT CGGCGCGCGC GTAACCAAAG TACGGAATCA CAGTCGTGAT CGATCGGCAA GACGCGCGTC TGCACGCATC AATCATCACC AACAACTCCA TCAAGCTGTC GTTCGTCGGC GGACACGTGG GCTGGACGAT GAAGACGTCG CAACCGCGAA TCGACTCTTT TATTTGAACG TAAATCTCCC CGTCGGCGAA ACGCTTAATC GTCGACTTCC CGAGCTCTAT CCCTAAATAA TTCGCAATCT CCTCACTCAG CGACGTGTGC GCCGTTCCCG AAAACACCTT CAACCGACGG CGCAGCACCG CCTCACCGCC TTGATCTTCG TGCTCGTCGT CGCGCGCGCC GAACCTCGAG TTCGCCATCT CGTTAAACAC CCCCGACGTC GCTCCCGGTC GGAAGTTTCC TCGCGAGAAC ACGTCTTCGC CCGCCGCGGC GCGCACCACC GTCCGCACCT GTTCGATTCC GCGCGTCGTC AGTCTCCGCG ATCTCTTTTT CGTCGACGCG TCCCGTCCCG CGCGTTCAAA CGCCTCGCGC GTCGTCCGCG ATCGCCGTTT CCGCGCCGCC GCGTCCGCGC GCGCCGTCCT CGGCGTCCGC GTTCGAGCGC GTCGATCGTT CGCGCGTCTT TTTCCCTCCT CCCTCGCGCG CGTCCGCGCG CGTCGTCGAC GCGCGCGTCC TCGAAGCGTC TCGCGCGTTC AAACGCACCG CTCGCGCGCC GCCGCGTCGC GTCGTCGTCG TCGTCGCGCG CGTCGCCGAC GCCGCGCGCG TCGCGCGCGC GCGCGGCGCG ACGCCGCGGA TCGCGCGCGC CATCGGCGCC GTCGTCGCCA TCGCGCGACG GCGTGTGCGG CGCCGCGCCA TCGCGCGCGA CGCATTGGCT CCGGGACATT GCCGTCTCAC TGTTTGCCCA TACAAAAGTG CCGAGAAAGT GACGAGAGGG TTTGCGCGCG CGCGCGACGC GAGAGCTCGA CGCGCGCGAC GCGACGGCGG CGCGCGCGCG CGGAACGACG TCGATGACGG TCGCGTCCCC GGTCGCGTCG CGCGCGGCGC GATCGCGCGC GGCGAGCGCG TCGACGACGC GACGACGAGG ACGACGCCCG GGGACGGGGA CGCGCGAGGG CGCGCGACGC GAGGGCGCGC GACGCGCGCG CGCGGCGAGC GTGCGCGTGG AGAACGACGA GGGAAAGGCG GACATCGAGA TCACGCCGGA GACGAGGTTC GAGGCGGTGA TCGGGATCGA GACGCACGTG CAGCTGAACT CGAGGACGAA GGCGTTTTGT CGGTGCGCGT ACGAGTACGG CGCGGAACCG AACACGAGGG TGTGTCCGAC GTGCATGGGA CATCCGGGGA CGCTTCCGGT GCTGAACTCG GCGGTGGTGA AGAAGGGGAT CGCGATCGGG ACCGCGCTCG GGGCGAAGAT ACGAAGGACG AGCAAGTTCG ATCGTAAGCA GTACTTTTAC CCGGATTTGC CGAAAGGGTA TCAGATTTCG CAGTTTGACG AGCCGCTGTG TTACGACGGA TCCATCGACG TGGTTTTACC AGTGGAAGAC GGCGGAGAGG TGAAGCGGGT GGGGATCACG CGCGCGCACT TGGAGGAAGA TGCGGGAAAA TTGACGCACG CGAAGGGCGA GGATGGGAAA AAGTACTCGT ACGCCGACTT TAATCGAGCG GGCGTGGCGC TGCTGGAGAT CGTCACCGAG CCCGATTTGC GCACAGGACG CGAGGTCGCG GCGTACGGTT CGGAATTGCG ACGAATAGTG CGGTTTTTGG ATGCGTGCGA CGGGGACATG TCCCGAGGGT CAATGCGAAA CGACGTCAAC GTGAGCATCC GACCGGTGGG TCGCGAGCGA TTCGGCACCA AAGTCGAGGT GAAGAACATG AACTCGTTCA ACGCGATGGC GCGCGCGATC GACTACGAGA TCGCGCGCCA AGAGGAGCTC ATTCGATCAG GGCGAGGCGA TGAAATCGTG CAAGAGACGC GCACGTGGGA CGAGGCCGCG CAGAAAACCG TCGCCATGCG CAAGAAGGAA GGCTTGGCGG ATTATCGCTA CTTCCCAGAA CCGGACATCC CCAAGCTGAG GCTATCGGAA GAGTTCATCT CGAACGTCGT GGCGTCCATG CCCGAGCTGC CGTCGATGGT TCGCGCGCGA TACGCCGCGC TCGGCTTGCC GCCCGCCGAC GTGCAAGTGC TCGTCGAGGA CAAAGAGCTC GTGACGTATT TCGACGCCGC GCTGAGCTCG AGCGCGAAAC CATCGGCGAA ACAAGTCGCC AACTGGCTCA CGGGAGACAT CATGGCCCAC CTGAAGAACT CAAAGATGGA AAATGTTTCC CAGCTCCCGC TCTCGCCCGA GGCGCTCGGC GAGTTTTGCG CCATGATCGA CGCCGGAGAA ATCAGCGGTA AAATCGGCAA AGATCTCCTC CCCGAGCTCT TAGAAAAAGG CGGAAGCGCG AAAAAACTCG TCGCCGACCG CGGCTTGTCC CAAGTTTCCG ACCCGCGCGA GATCGAAGCC TTGGTTGACG GCGTCCTCGA AGCCAACGCC GGGCAGCTCG AGCAGTATCG CGCCGGCAAA ACCAAGCTCA AGGGTTTCTT CGTCGGCGCG TGTCTCAAGG CCAGCGGCGG TCGCGCCAAT CCATCTCTCG TCGATCGCAT CTTACAAGCC AAGCTCGACG GCGTTCCGAT CGACGTCGCG TGA
|
Protein sequence | MTTKQPTRFE AVIGIETHVQ LNSRTKAFCR CAYEYGAEPN TRVCPTCMGH PGTLPVLNSA VVKKGIAIGT ALGAKIRRTS KFDRKQYFYP DLPKGYQISQ FDEPLCYDGS IDVVLPVEDG GEVKRVGITR AHLEEDAGKL THAKGEDGKK YSYADFNRAG VALLEIVTEP DLRTGREVAA YGSELRRIVR FLDACDGDMS RGSMRNDVNV SIRPVGRERF GTKVEVKNMN SFNAMARAID YEIARQEELI RSGRGDEIVQ ETRTWDEAAQ KTVAMRKKEG LADYRYFPEP DIPKLRLSEE FISNVVASMP ELPSMVRARY AALGLPPADV QVLVEDKELV TYFDAALSSS AKPSAKQVAN WLTGDIMAHL KNSKMENVSQ LPLSPEALGE FCAMIDAGEI SGKIGKDLLP ELLEKGGSAK KLVADRGLSQ VSDPREIEAL VDGVLEANAG QLEQYRAGKT KLKGFFVGAC LKASGGRANP SLVDRILQAK LDGVPIDVA
|
| |