| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_17095 |
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| Symbol | |
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| ID | 5004162 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009364 |
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| Strand | + |
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| Start bp | 363789 |
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| End bp | 368482 |
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| Gene Length | 4694 bp |
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| Protein Length | 1428 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 640419583 |
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| Product | predicted protein |
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| Protein accession | XP_001419980 |
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| Protein GI | 145351215 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5308] Nuclear pore complex subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0366064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0215863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACGC GCGATCGGGA CGCAGACGCG CGAGAGGCGA TGGAGACGGC GGCGAAGACG
GTGTCGAAGC TCGCGGCGGA CGCCGAGCAA GCCGACTTGG TGGAACTGCT TCGAGAGGCG
CCTCGGGAGG CGTATTCGTT TCAAAACGCG GGATGGCCGA GCGATGTGGT GGGTATGAAG
AAGGAGGAAC TGCCGGGGGT GGTGCTGGAG CGGTACAACA CGCGGCAGTC GGTGTGCTTT
TGCGGGGTGC TGCCGGAGAT TTCGCGCGCG TGGGCGAGCG TGGACAACGC GTTGTTTTTG
TGGAGGTTGG ACGTCGCGGA CGACGTGCCG GTGGAGTACA GCGGCGAAGA GCAAGCGATC
GTGGCGGTGG GGTTGGTGAA ACCGAAGAGT GGGGTGTTTT TAGAGGCGAT CTCGTACGTG
CTCGTCATCG CGACGACGGT GGAGCTCGTC ATGGTGGGGG TGTGCTTGGA GGACGACGGA
CGCGAGCTCA CGCTGCATCC GCTGCAGTAC TCGTGCCCGA CGGACGCGAC CATCATGAAC
GACATCACGT CTACGCCGGA GGGTAGGATC TTCTTAGCCG GTGCGGACGA AGCGCTTTAT
GAACTCGTGT ACGCGCAGAG CGACACGTGG CACAGCAAGC GATGCAAAAA GGTGCGACAC
AGTCAAAACT TGTCCTCGCT GTTGCCTTCG GTGCTGCGAT TGAAGGGCTC GGACGCTTTG
AAACAAGTCG TCGTGGACGC CAAGCGCGGG ATTTTGTACA CGCGCAGCGA ACAAGGCGTG
GTGGTTGTGT ACGACGTCGG CGCCGCGGCG AAGGACGCGC CGAGAAAAGT CGCCGAGGTT
AAAAACGTCG CGCAACTCGC CGCGCAGGCT CGCGGTCAAG GGTCTCTGTT TGCATCGGCG
ACGTCATCGG TGAAGAAAGG GGCGAAGTTA GTGCACGTCG CATTGGTGCA TCCGGAGGAG
TCGTCCGTCG TGACGTTGGT GGCGATTTGC GCGGATGGAA GACGCATTTA CCTCACCGCT
CTTCCGCCGT CGCGCGGGTA CTCGTACGGC GTCGCCTCGG GTACGGGTAG CTCTCGACAA
GGGCCTTCGC GACTGTCCGT GGTCGAACAA CGCGACCCGC CGCCGCAAGG AGGAAATCAG
CGCGGTATGA CGACGGCGCA GGCGCTCTTG AACACCACGT CGAGGGCCTT GGAAATTGAA
GCCGGGTTTT ACAGCAGCGG CGTTTTGTTA CTGTCGGACG CGACGCCGAA CGACTCTGAC
GCGCGATTGA TACTTTCAAA CCGCGACCTG GCGCTACCCC CACACTTGCA GTTGCCGCCG
CCGACGCCCC CACCGAGCTC GGGAAGCGGC ACTCGCGGTT TGCGCGAAGT CGTCACCTTG
GAACAACTTG AAGGGCGCTG CGCGTCGAGT CTCGGATCGC TCGGTGAGAT TCCTATGCCA
AAGAGCGTAC AGGACGCGAT CGATCCGCCA TACCCCACGG GGACGCTTCC AGAAGCACGT
GTAAAATCGA CGGGACTACT CTCTGAGCTC GTCACGCAAT ACATGTGCCC GAGAAGAACG
TTTGTGTTGA TGACCAACGC CGGGTTGGTT CGATTCGAGA AGGCGCGCCC GATTGACACG
TTGAGAAGTG TTCTTGAAAA GAACATTCCG GAACAAATCG AGGAGTTCTT TAAGAGTTAC
GGACCGATTG AAGCTGCGGC AATGTGCGTC GCGTTATCTG TTTCGGGATC CGAATCCAAC
GCCGTGATCC TCGCCGCGAA GCGGGCCTTT GACGACCCGC GTCTCACCGG CGAGCCGAGC
ATCGTGGAGG ATAGCTACGC GCAAAATCAA GAGAATAATG GTGGATCTTT CAACATGGGG
CGTGCGATCG TGCAACCGGT GCTGACTTTT TCGTCGGCGC AGCGTGGACT GTACTTGTTC
ACGGCTCGCA TAATGTCTAG CACGTGGGAA CGAGCGATCA TTGTGCCCGT TCGCGCGCCC
GTTCAAACGA ATTTGAACGG CAACTCGCGA CCGCTATCGC CGGCGATGAA GATCGCGAAC
AAAGCGCTCG GCGCGGTGCA AGCGGCAGCT CGGTACATGA GTGAAGAACC GGCGCTCAGA
TGCTCCTTGG ATCCGACGTT GCTCAAGAAT TTGCACGATC GCTTGATGCC GTTGGTGACT
TTCTTGAAGC AGCGTAGACC GCGCATTAGC AGCGGCGCCA CGATGTCGCA GACGAAGCGG
CGTCGAGTGC GTTCATCCGG CAGCGAACTC ACGGCACTCC AGGAAGAAGA GCGCAGTCTC
TCGGCCCTCT CCGCCTTGGT GAGCCGCACG GCGCAGGCTT TGTCTCTCAT TAGAATCATC
ATCACTGATG AACGTTTCTC ACGAGTGGCC GACATGCTTC CCTCGGCGAT TCGCAAGGAG
CTGTCACAGG TACGTTTCCG CGCTCCTACG CCTCGTCTTT TCTTTTTTGC CTGCGCGATG
ATGATTTCCC ATATATCAAT CTGTCAATCC CCTGATTCAC AGTGATGACA ACTCATATGG
TGCCCTTCCA CTGAGCGTCC ACTTTTACTT TTCCGCGCTG TGTTCTTCTG AGACTTTCGA
CTGACTTTTT GTTTTACACT GCGACAGCTC ACCTTGAAGA AGTTGGTTTC GACGACGCAC
GGGGCGCGTT TGGCGGGTGC GCTCATCGAA GCGATGATGT CTCACATAAT GTCTCACGCT
CGTCACAGCG CCGAGGAATT AGCTGCGGAG CTCCAAAAGG GATGCCCAGA CTTTTTCGGC
GCAGATTCGA GGACATTTTA CCACGCCAGA GACTTGTTGC AGTTGGCGCG CGACGCGCGC
GCGAGAAAGG AAAACGTCTT GCGCGACCAA TACGTGAACG ATGCGATCGC TTTATTCATG
AAGGTGCCGA CTTCTGGAGA CTTATCGGCC GTTTGTGCTG AACTTGTCGA TCTTCGCGCG
TTTCATGGCG TCACCGCTGT GCCCCTCGCG GCGGCGGCGG CGCTCGAGGC GCGCGCAGAG
GAAGCTCGTT TTACGATGCA TTCGCAACCG AATGTGGACA TGGTGGTAAG TTTATCTTGA
CCTCAAATCT CGAAAGAACT TCGTTGCGAT GAAGACGAAT CTGATACGTG AACGTTCGGC
TTACCGCCGG GCGTGCCGTG ATGATTAAAA ACTACAGAAC ATCTAAGCCT GAGCGACGGC
GAATCATTCT CGGCTCGAGT CACGACGGGA TCGCGAAAAT CTCTTACTGA CGACAAATTT
TTACCGCATT ATAGGATCTC CAATCGTGCT TTGAAGTCAC GTGTACCACG ATTCGGGCGC
TTGCGACTGG AAGGGCTGAT GCGGACGCTG AACCAGGTTC GCTGAGTCGC GTCGCGGCGG
AAGAACTTCC CGAGGACATT CGTGAACGAG GTCTCGTGAA GATTCTAGAG CAGCTTCAAC
GAGTGTCTGG AGCTGACTCA CAAGATTTCA TGCACCGCGT ATTTGCGGAG CTGATTGCAG
TGAGACGCGA CGCCATGCTT TTATCGCTAC CCGCGGCTAT GTTGGAACCG TACTTGGTGA
ACAAGAGCGC GTTGACGTCT GCGCAACAAG GCGGCGCGCT CACGCCGGAT GAGGCGAGAC
ATCTCGATCT CTTGGCGCAG TTGTACGCCG CCCGAAGTCT GTTTGGATTG GCGGCACAGG
TCGATTGCTC GTTAGCGGAG CGTCGATGCG CGAACGACGA AACGTTCAGT TTGGACCAGC
GCATGGCTTT GTTTGAGCGC GCGCTCATGC ACGCCAGAAA GTCGGTCGAC GGGGGATTGA
CCAATGGTTT GGACACGTCG TTTTGCGAAA ACGTCGACAG CAAAATCAAA TTGCTCGACA
TGCAGCGGCG AGTGCTGGGC GTGTGCATAG AGCGCTCCCG TCAAGCACGC GCCACCGGAT
CGTCGAACGC TCCGGAGGAG GCGTTTGTGT ACGAATTGGA GCGCGAGTTG AAGCAACTGA
GCGACTTGTA CAACGACTTC GCCAAGCCGT GTGAGTTGTG GGACATCTGC CTCGAAATGG
TGCACTTCTC GCAATACCAC GATCCGGATG GCGAGATTGT GTGTGACTTA TGGGATAAGC
TCCTCTTACA AGCCGCGTCT CGCGCGCCGA GCGCCGCGAC GTGCCTGCGG GAAGCCTGCC
TCGTGGTTCG CGCGTTGGGC GTGAAGTTGT TCCCATCGGA CGTCGCGTTT CCGGTCATTC
ACGTGGCTTT GCGTTTGGAG CTCATGGCGG CAGGACTGTG GGGTGTTCCC GATGTCGCAG
TCGAAGCGCA CGTCGACGAT GAGTATGACA CGAGCGAAGT CGCGGACGCG CTCGTCGTCG
CGTGCAAAGG ACTCGCAGAG CCCGTGCAAC GAGCGTACGA CCGCTTGCTC GCGACCCCGG
CCCAACGCAT GCACGATAAG CGTCTGTCGA AAGTGGATGC GTTACAAACC CCGCGTTTGC
GCCTCCGCTT GCTCAGATCG GTGTACTTTG TGCTCCAGCT TTGGGACCAG TCGCTCGTGC
CCAAGGCGAC GGCGTACGGC GAACCGAGAG CGTACGCCAC CGGAGGCCAC GTGCGCGCGG
CGATCGGCGA CTTGTGCGTG AGCTACGCCT CGGAAAGCCG ACGAATGCAG TGTCCGAATG
AGGTTATTCG CGCGAACGCC GAGGAACTCG CCGCCGCTTT CGACACGTTC GGCCGCCGCT
TGCTTTCTTC GTAG
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| Protein sequence | MRTRDRDADA REAMETAAKT VSKLAADAEQ ADLVELLREA PREAYSFQNA GWPSDVVGMK
KEELPGVVLE RYNTRQSVCF CGVLPEISRA WASVDNALFL WRLDVADDVP VEYSGEEQAI
VAVGLVKPKS GVFLEAISYV LVIATTVELV MVGVCLEDDG RELTLHPLQY SCPTDATIMN
DITSTPEGRI FLAGADEALY ELVYAQSDTW HSKRCKKVRH SQNLSSLLPS VLRLKGSDAL
KQVVVDAKRG ILYTRSEQGV VVVYDVGAAA KDAPRKVAEV KNVAQLAAQA RGQGSLFASA
TSSVKKGAKL VHVALVHPEE SSVVTLVAIC ADGRRIYLTA LPPSRGYSYG VASGTGSSRQ
GPSRLSVVEQ RDPPPQGGNQ RGMTTAQALL NTTSRALEIE AGFYSSGVLL LSDATPNDSD
ARLILSNRDL ALPPHLQLPP PTPPPSSGSG TRGLREVVTL EQLEGRCASS LGSLGEIPMP
KSVQDAIDPP YPTGTLPEAR VKSTGLLSEL VTQYMCPRRT FVLMTNAGLV RFEKARPIDT
LRSVLEKNIP EQIEEFFKSY GPIEAAAMCV ALSVSGSESN AVILAAKRAF DDPRLTGEPS
IVEDSYAQNQ ENNGGSFNMG RAIVQPVLTF SSAQRGLYLF TARIMSSTWE RAIIVPVRAP
VQTNLNGNSR PLSPAMKIAN KALGAVQAAA RYMSEEPALR CSLDPTLLKN LHDRLMPLVT
FLKQRRPRIS SGATMSQTKR RRVRSSGSEL TALQEEERSL SALSALVSRT AQALSLIRII
ITDERFSRVA DMLPSAIRKE LSQLTLKKLV STTHGARLAG ALIEAMMSHI MSHARHSAEE
LAAELQKGCP DFFGADSRTF YHARDLLQLA RDARARKENV LRDQYVNDAI ALFMKVPTSG
DLSAVCAELV DLRAFHGVTA VPLAAAAALE ARAEEARFTM HSQPNVDMVD LQSCFEVTCT
TIRALATGRA DADAEPGSLS RVAAEELPED IRERGLVKIL EQLQRVSGAD SQDFMHRVFA
ELIAVRRDAM LLSLPAAMLE PYLVNKSALT SAQQGGALTP DEARHLDLLA QLYAARSLFG
LAAQVDCSLA ERRCANDETF SLDQRMALFE RALMHARKSV DGGLTNGLDT SFCENVDSKI
KLLDMQRRVL GVCIERSRQA RATGSSNAPE EAFVYELERE LKQLSDLYND FAKPCELWDI
CLEMVHFSQY HDPDGEIVCD LWDKLLLQAA SRAPSAATCL REACLVVRAL GVKLFPSDVA
FPVIHVALRL ELMAAGLWGV PDVAVEAHVD DEYDTSEVAD ALVVACKGLA EPVQRAYDRL
LATPAQRMHD KRLSKVDALQ TPRLRLRLLR SVYFVLQLWD QSLVPKATAY GEPRAYATGG
HVRAAIGDLC VSYASESRRM QCPNEVIRAN AEELAAAFDT FGRRLLSS
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