Gene OSTLU_17087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17087 
SymbolRPL31 
ID5004014 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp332117 
End bp332850 
Gene Length734 bp 
Protein Length116 aa 
Translation table 
GC content63% 
IMG OID640419435 
ProductRibosomal protein L31, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001420147 
Protein GI145351574 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2097] Ribosomal protein L31E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0106125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0023739 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCCGCG AATCCAAGCC CGCCGACGTC ATCACGCGCG AGTACACCAT CAACCTCGGC 
AAGGCCATCA CCGGCGTGAC GTTCAAGAAG CGCGCGCCTC GCGCGGTCGC GGCGGTGCGT
GCTCGATCGC GCGCGCGCGA CGAGACCCTA GAATGGATGC GCGACGCGAC GCGCGAACGC
GCGCGGACGC GCGCGCGAGG ACGCGAACGC GACGAGACGG ACGGATACGG TCGATCGAAA
TGCGCGCGAA CGATCGGGCG TCGCGCGAGG GGCGCGGACG CGCGGATGCG CGCGGACGGG
AGGATGAGTG CGATCGATGA CTGACCGCGC GACGATGCGT GTGCGACGGA CGTAGATTAA
AAAGTTTGCG CAAAAGACGA TGAAGACGTC GGACGTGCGG ATCGATGTGA AGCTTAATAA
GGCGGTGTGG AGCAAGGGCA TTCGTAACGT GCGTGATCGG CGAAGCGAAC GGACGCGGAT
GGGATGATGA CGACGACGAG CGACGCGACG CGCGACCCTA GAGGAACTCG AAGGCGACGA
CGAGACGGAG ACTGACGAAG ATGCGAACGC TCGTCGTGAA TGATGCGCAG GTCCCGAAGC
GAATTCGCGT GCAAATCTCC CGCAAGCACA ACGACAACAA GGATGCGGAT GAGGATCTTT
ACTCGTACGT CACCGTGGTC GACACCCCGA ACGGGTTCAA AGGTTTGGGA ACCGAAGTCG
TCGACCACGA GTAG
 
Protein sequence
MGRESKPADV ITREYTINLG KAITGVTFKK RAPRAVAAIK KFAQKTMKTS DVRIDVKLNK 
AVWSKGIRNV PKRIRVQISR KHNDNKDADE DLYSYVTVVD TPNGFKGLGT EVVDHE