Gene OSTLU_12975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12975 
Symbol 
ID5004087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp276277 
End bp276936 
Gene Length660 bp 
Protein Length219 aa 
Translation table 
GC content55% 
IMG OID640419508 
Productpredicted protein 
Protein accessionXP_001419957 
Protein GI145351169 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0344901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.45996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGA GCAATCCGTA CGAAGAGTCC AAACACAAGC CTGGATACGT CGGATTGCCA 
TTACCCGGTG TTCAAGTGAA GCTCGCACCT TTGGTTGGCG CGGACGGTGA CGAGGACACG
TCGGATGTCG ATTCCGGTGA GTATCTTCAA GGTCCGGGTG AGCTCCTCGT CAAAGGTGAC
AATTTGTTCA CAGAGTACTA TGACAACGCA GAGGCGACGT CGGAGAGCTT TGACGAAAGT
GGATACTTTA AAACGGGAGA TGTCGCAGCG ATGGCAAGCG ATGGGTTTTG GCGCATTCTC
GGGCGCGCAT CTGTGGACGT GCTTAAGATA GGAGGCTTCA AGGTGAGCGC GCTCGAAATC
GAGGCGCGCC TGCTCGAAAA TCCATCCATC GCCGAAGTCG CCGTATTGGG CATCCCGGAC
GAAGCGTACG GACAACGAGC GGTTGCGCTC GTCGTTCTCG CGCTCGACAT GGAAACGGGC
GAGCCCGCAA ATTTGACGGA GGGTGATGTA ACGCTGTGGG TTCGCCAAAA TTTGGCGTCA
AAGATGCATT TGCGCGTCGT CAAGTTTGCC GACAAAATGC CTCGAAACGC CATGGGCAAG
GTGAACAAAA AGGACTTGCA AAGAACGCAC TTTGCCGAGT ACTTTGAGCA GCAGCAGTAG
 
Protein sequence
MALSNPYEES KHKPGYVGLP LPGVQVKLAP LVGADGDEDT SDVDSGEYLQ GPGELLVKGD 
NLFTEYYDNA EATSESFDES GYFKTGDVAA MASDGFWRIL GRASVDVLKI GGFKVSALEI
EARLLENPSI AEVAVLGIPD EAYGQRAVAL VVLALDMETG EPANLTEGDV TLWVRQNLAS
KMHLRVVKFA DKMPRNAMGK VNKKDLQRTH FAEYFEQQQ