| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_94724 |
|---|
| Symbol | |
|---|
| ID | 5003802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009363 |
|---|
| Strand | - |
|---|
| Start bp | 411356 |
|---|
| End bp | 413296 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640419223 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419800 |
|---|
| Protein GI | 145350831 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5260] DNA polymerase sigma |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.127729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000571267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCA CGCGGTTCGA GGGCGTGCGG GTGGCGCCGT TTGGGTCGTA CGTGAGCGCG
TTTCACTCGG CGGGGAGCGA TATAGATATT TCGCTGCAGA TAGACAAGAA TGGACCGTGG
TACGATGAAA AGGAAGAAGC GCAGGCGCGC CGATCGCAGC GGGGCGGGGT GCGCGCGCGT
CGACAACAGC GCCAGGGTCG AACGAAACGC GCGCAATTGT TGCGCAAAGT CGCCTCGGAG
TTGCGGTATC GCAATTACCG CGACGTCCAA CTCATCTCCA AGGCTCGGGT GCCTTTGATC
AAGTTCAAAG ACCCGCAGAC GGGCGTCGCG TGCGATGTGT GCATCGAGAA CGACGGGGTG
TACAAGAGCG CCGTGCTCGG CGTCGTCGCG GATATCGATC AACGTTATCG CGACTTGGTG
TTCTTGATAA AGCTTTGGGC CAAGCATTAC GATGTGAACA ACGCCATGGA GGGATCGTTC
AACTCGTACT CGTTGTGTTT GCTTTGTATG CATCATTTGC AGCGCCGACC AGTGCCAATT
CTGCCGCCGA CGATGCTGCT CACGCTTCCT CGTCCCGATT TGGTGGAATC GGAAAAGCGC
GAACTCGAGG AGCATTTGAA AAGTGAGGAC GACCAGTTCG ATACTTGGAA AGTTAGTAAA
GCTCGCGTCG TGAGTGATGC ATCGAGGGAC ATCGCGGCGG TAAAGTACCG CGCCGATAAG
TTCGCGGGTT TCGGAAAGGA AAACACCGAG ACGCTCGCGG AACTCTTTGT GAGCTTCTTC
GCGCACTTGT GCGCCATCAA AGATTTGTTT CGGAACGCGG TGAACGCGTC CACGTATCAT
GGTACGTTCA TCGTCGGTAG CTCTTGGCAA GCGTTCAAAT ATCCACTCGG TGTGGAAGAT
CCGTTTGCCG CCGGCGACAA CGTCGCTCGA GCGGTTCAAA TGCGCACGAG AGATTACGTG
TTGAACGCTT TTCCTGCGGC GTGTGCAGAT ATATCCAAGA TGCTGCACGC CACGGACAAC
GTACAGTTCA TGCGCTCGTT ACTGTGCTTG CTCGGTGATA AGAGCGTACC ATCCGAAGTC
TTGGCGCGTC TCAGACCGAC GCTCCCCGGC ATGGGCGGCG CGCCGCAGCC GCCGGGGTTG
CCGGGAGCAC CGCGACCTCC TCAAGGCCCA CCTGTGATGC TTCAACAGCC AGCAAAGTCG
CTCAATGAAC ACACGTTGGA TATGCTCGGC AGACAAGTCG CGCCAGGAGC GTCGGCGGAG
GAGATTTTGG CGATGTTGAC GCGTCAACGA CAGGTGCAAG CGGAGGCGCA GCGAGACCAG
TCGCAACCGA GCGAGCAGCA GATGTTGTTG CTGCGACGGC AGCAAGAGCT TTTGCGCATG
GAACAAGCAA AAATCCAGCA GCACATGCAA CAGGGACAGC CGCCACCGCA GCCAGGTCGC
ACGACGCAGA TCCCGGTGGC GAGTTTGTTT GGGCAGCCGC AGCAACAGCC GCAGCAACAG
CGCGGCCTAC CGCCCGGTTT CGGTCCGACT TCGCAGCTGC AGATGCCACC ACCGCAGCCA
CAGATGCCGA TGGCAACGGC GCTACCTTCG TTTGGCGCAC CCCCTCCGGC CAACGGTGGC
TTTTCGAACG GCGGCCTCGG CGGCGGCGTC TTCTCGAGCA TCGCCTCCGG CGGCGGCGGC
TTATTTTTCG ACGCCCCGGC GCGCCAATCC AATCCGCCGC CGCCGACCGC GCACGCCGTC
GACGAAATCT CCCAGCATTT TGCCACCGGC ATGTCCATGT TCGGCTCAAA CGTCCACGCA
CCTCCACCCG ATCTCGGCGT CCGCTCGCCG CCCGATCTCG CCGCCGGCGG TTCGCCGCCG
GCGTCGCGCG TCGTCCCTCA GTCCGAGCTT CCTCGCACTC GCAGCGGCGT CGCCATCCCC
AAACCGCGCA ACGCGCGTTA G
|
|---|
| Protein sequence | MISTRFEGVR VAPFGSYVSA FHSAGSDIDI SLQIDKNGPW YDEKEEAQAR RSQRGGVRAR
RQQRQGRTKR AQLLRKVASE LRYRNYRDVQ LISKARVPLI KFKDPQTGVA CDVCIENDGV
YKSAVLGVVA DIDQRYRDLV FLIKLWAKHY DVNNAMEGSF NSYSLCLLCM HHLQRRPVPI
LPPTMLLTLP RPDLVESEKR ELEEHLKSED DQFDTWKVSK ARVVSDASRD IAAENTETLA
ELFVSFFAHL CAIKDLFRNA VNASTYHGTF IVGSSWQAFK YPLGVEDPFA AGDNVARAVQ
MRTRDYVLNA FPAACADISK MLHATDNVQF MRSLLCLLGD KSVPSEVLAR LRPTLPGMGG
APQPPGLPGA PRPPQGPPVM LQQPAKSLNE HTLDMLGRQV APGASAEEIL AMLTRQRQVQ
AEAQRDQSQP SEQQMLLLRR QQELLRMEQA KIQQHMQQGQ PPPQPGRTTQ IPVASLFGQP
QQQPQQQRGL PPGFGPTSQL QMPPPQPQMP MATALPSFGA PPPANGGFSN GGLGGGVFSS
IASGGGGLFF DAPARQSNPP PPTAHAVDEI SQHFATGMSM FGSNVHAPPP DLGVRSPPDL
AAGGSPPASR VVPQSELPRT RSGVAIPKPR NAR
|
|---|
| |