Gene OSTLU_88171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88171 
Symbol 
ID5003732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp162612 
End bp163502 
Gene Length891 bp 
Protein Length296 aa 
Translation table 
GC content66% 
IMG OID640419153 
Productpredicted protein 
Protein accessionXP_001419507 
Protein GI145350209 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.31194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGGA CGAACGCGAC GGAGACGACG ACGCATCGCA AGGTGCGCGT GCTCGTGATC 
GGCGACTCGG GGGCTGGGAA GACGACGCTG ACGCGCGCGC TGGTCGGCGG CGGACGACGC
GGGAGGGAAG AGCACGGACG AACGAGCGGG TGCAGCGCGG AGGTGATGCG AGCGAGCGAA
GAGGGCGCGG AGGGGACGAC GGGGACGCGC GACGCGGCGA CGTACTTCGT CGAACTGTGG
GACGTGGGGG GACATCGACA GTATAAACGA GAGCGAGGGA TATTCTACGA TCAGATAAAC
GGGGTGATAA TCGTGCACGA TGCGTCGATG CGAGCGAGCG GGGCGCGGTG CGAGGCGTGG
GCGCGAGAGG TGGCGACGAG AGGGACGTTT TCGGCGCCGA CGCCGACGGC GGAGAGTTTC
GCGAGCGGCG AACAGCCGTG CGTGATGTAC GGTTTCGGCG GTTTACCGGT GCCGTGCTTG
ATCGTGGCGA ATAAGGTAGA TTTAGAAAGC GCCGCAAACG ATGGGTTCGG TCGAGGAGAT
GGACTTTTAC GGCGTGCGCT AGACTTTTTT GGCGATAAAA GCCGGCGCCG GCGGTCGATT
CTTCCGGAAA CCATCGGCGA AGCCGCGCGC GCGAGCGCGT CGGCGGCGCA CAGACGCCAA
CCCTCGTTCG GGGCGACCGC GCTCGCGAAA CTTCCACCGG GTGGCGGTTT GCGCACGTCC
GCGACGCTCG GTCGTATAGA CGTGGACGTC ATGCATGGGT TCTTTCGCGA GCTCGTCCGC
CGTCGATACG ACGCCGCCGT GATCGACGCC GGCGCTTCGC GCACGTCCGA GCGGCTTTTA
CACGCCAAGC CCGCCGCGCT CGTGGATGAT GATCTCGACG ACTTAACCTA G
 
Protein sequence
VTRTNATETT THRKVRVLVI GDSGAGKTTL TRALVGGGRR GREEHGRTSG CSAEVMRASE 
EGAEGTTGTR DAATYFVELW DVGGHRQYKR ERGIFYDQIN GVIIVHDASM RASGARCEAW
AREVATRGTF SAPTPTAESF ASGEQPCVMY GFGGLPVPCL IVANKVDLES AANDGFGRGD
GLLRRALDFF GDKSRRRRSI LPETIGEAAR ASASAAHRRQ PSFGATALAK LPPGGGLRTS
ATLGRIDVDV MHGFFRELVR RRYDAAVIDA GASRTSERLL HAKPAALVDD DLDDLT