Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_5654 |
Symbol | |
ID | 5003541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009363 |
Strand | - |
Start bp | 158556 |
End bp | 159257 |
Gene Length | 702 bp |
Protein Length | 234 aa |
Translation table | |
GC content | 52% |
IMG OID | 640418962 |
Product | predicted protein |
Protein accession | XP_001419729 |
Protein GI | 145350683 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.221345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.32323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GCTTTGAACC CGGAAACGGA CCAAAACTCG AAGATAAAGA AGAAGCATGT CTTTGTGTTG AACTTTTTTG GCGACGTGCG CGCATCTCAA GCGGAACAGC TCCGTGAAGA AGTCACTGGT TTGTTACGTT CGGCGAAAAA GGAACGAGGT GATGAAGTTG TTTTGCGGTT GAATACGGGT GGCGGTACGG TCACTGGCTA CGGGCTTGCC GCTGCGCAGC TGATGCGAAT CAAAGACGCC GGTCTCAAGC TGACCATCTG TGTCGAGCAA GTCGCCGCCT CTGGTGGGTA CATGATGGCT TGCGTGGCCG ACGAAATCGT TGCGTCTCCG TTCGCGGTTC TCGGTTCTAT CGGTGTCATT AGCGAGCAAC CTAATGTCTA CGAGCGGCTT CAACGGGAAG GTATCGAATT TCAAACTGTC ACCGCTGGCA AGTTCAAGCG AACCTTGACG CCCACGAAGA AGGTCACCGA GGAAGACTTG GAAAAGTCAA AGAAGGACAT CGAAGACGTT TTGGTGCTCT TCAAGGGTTT TGTCGCCGAA AATAGACCGA CTTTGGACAT TGACAACGTC GCGACGGGCG AGACGTGGTT TGGCAAAGAT GCGCTGTCGA GAAATTTGGT GGACAAACTC AAAACGTCTG ACGATGTCCT TCTCGACCTC CTCAGCGCTG GCGCCGAAAT TTTTAGCGTC CAGCTTAAGC AA
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Protein sequence | ALNPETDQNS KIKKKHVFVL NFFGDVRASQ AEQLREEVTG LLRSAKKERG DEVVLRLNTG GGTVTGYGLA AAQLMRIKDA GLKLTICVEQ VAASGGYMMA CVADEIVASP FAVLGSIGVI SEQPNVYERL QREGIEFQTV TAGKFKRTLT PTKKVTEEDL EKSKKDIEDV LVLFKGFVAE NRPTLDIDNV ATGETWFGKD ALSRNLVDKL KTSDDVLLDL LSAGAEIFSV QLKQ
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