Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_50546 |
Symbol | |
ID | 5003913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009363 |
Strand | + |
Start bp | 99682 |
End bp | 100817 |
Gene Length | 1136 bp |
Protein Length | 334 aa |
Translation table | |
GC content | 57% |
IMG OID | 640419334 |
Product | predicted protein |
Protein accession | XP_001419490 |
Protein GI | 145350171 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00915074 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0604025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ACGTCGACGA TGGGTTTGAT GAAGAGATCA GCAATCAGAA TGGCGATAAA ACCGGTCTTG ATCGCGTGGG CGTGAAGATT ACGGCGTCTT CGTTGTACAT TCTTCAGGGC ATCGTCGAGT ACACGGCGCT GATGCAAGTA ATGCGGCCGA GCGTGCCGGT GATTTTCAAC GGTATCTGTC AACTCTTCGA GCTCGCACTA GTGAAAACTT TTAACGCTTT CGGGCGAACG GAAGCTTTGC TTCCCGAATC GCACGACATG ACGCCGCGGC TGCGAGGTAC GTTGTCTAGA CTCGGGAACT CGGGTGGCGC CATGGCGATT CGACCTACGA TTCGGGGACA AGGGGACGTA GACATCTTGT CCAGCGGTAA TTTGTACGGT TTGAAGGAGC GCGGCATCGC GCTCGAGTCG CTCTCGCGCG TCGCCGATGA GTTCAAGCGC ATCAAGGCGC GTGTGAAACG CTCGCTCCCG CTCAAAGACG CCGCGCTGGC GGATCGCTTT TACTCGCACA CCGTCGCTGC GGTGGACGAT TTGCGCGAGC ACGTGTACAA GAACGTTGCT TCATTATTGC TCAACATTGA ATTTTGCGCA GAAGCGATCG GAGACGGCGA TCCAAACTTT GCGTTGGTGA ACTCTACGTT CGTGGGCAAG TACAACATTC GCGAGACGCC GTCGAGGCAC AACAAGTGGG TGGACGACGT CCAGGCCGAA CTCTTACAGT TCACCACCAA ACTCGCCTGC GCCGACGTCG CACCTGAAGC TCTGGATGTT CTGTGGCAGC ACGCCGCGAG TGTGATCCAA GACTCTCTCG TCGATGGTTT CAGCAAGGTG AAAAAATGCA CCGACGCCGG CAGAGCGCTC ATGGCGCTCG ACGTCGAAAC CCTGCGCGGC GAATTCGCGA AACTCGCCCC GTCCCAGTCC CTTGCCTTCG ACTGGCGCTA CGTCAGCACC TACATCAACG CCTTCTACGT CCCAGAAAAA GACGTCGAGA AATGGATGCA AATCCATCCC GAGTTTTCCA AAAAACAAAA GCTCGCCTTG GTCGCCCACA ACGCCTCGGC GGATCGCGAC AGGCGCTGGA CCGCGAAATT CCGCCAAGAC TTGCTCAACG CCATCGAAAC CGACACGTTA CTCTAG
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Protein sequence | MQVMRPSVPV IFNGICQLFE LALVKTFNAF GRTEALLPES HDMTPRLRGT LSRLGNSGGA MAIRPTIRGQ GDVDILSSGN LYGLKERGIA LESLSRVADE FKRIKARVKR SLPLKDAALA DRFYSHTVAA VDDLREHVYK NVASLLLNIE FCAEAIGDGD PNFALVNSTF VGKYNIRETP SRHNKWVDDV QAELLQFTTK LACADVAPEA LDVLWQHAAS VIQDSLVDGF SKVKKCTDAG RALMALDVET LRGEFAKLAP SQSLAFDWRY VSTYINAFYV PEKDVEKWMQ IHPEFSKKQK LALVAHNASA DRDRRWTAKF RQDLLNAIET DTLL
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