Gene OSTLU_50496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_50496 
Symbol 
ID5003900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp553918 
End bp556575 
Gene Length2658 bp 
Protein Length869 aa 
Translation table 
GC content60% 
IMG OID640419321 
ProductClC family transporter: chloride ion channel 
Protein accessionXP_001419633 
Protein GI145350481 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.913408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.293754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGT TCGAGTCGCA CGATTACGAC CCGATCGATA ACGATCTCGA GGAGGACGCG 
CTGCGGGGAC GCACGCGAGA AGACTATAAA CGCGAGCGAG CGTGGAAGTG GGCGACGAGC
GTGATGATCG GTGCGGTGAT GGGAATCGTG GCGTTCGTGA TCGATGGATT GGTGGATAAG
CTGAATTTGT TTCGGTACGG GGTGATCGGA GATAAGGTTG GGACGGACGG ATACGCGCGG
TTCGTCGCGT GGTTGCTGCA CGCGGTGGTG AGCTGCGCGT TCGCGGCTGT CGCGGGAGGG
CTGGTGTCGT ACGTGGAACC GCTCGCCGCG GGATCGGGGA TCCCGGAGTT GAAGACATAC
TTGAACGGCG TCCACCTCAA GGGGCTTTTG CGGTTGAAGA CGGTGGTGGC GAAGCTGGGG
GGGATTTCGT TTAGCATCGG CGCGGGATTA ATCGCGGGCA AGGAGGGACC GTTCGTGCAC
GGAGGTGGGT TAGTCGGGGG TGGGTTGAGC GCGTTCGGGT CAAACACGCT CGGCTTCAAA
TTGAAATATC CCGCGTGGTT CCGAGATGAT CGACATAAAC GGGACTTTGT CGCCATCGGC
ACCGCCACAG GCGTGGCGGT GGCGTTCGCC GCGCCCATCG GCGGCATGTT GTTCACCGTG
GAGGAGGGTG CGAGTTTTTA CAACTCGGAC ATGTTATGGC GCGGGTTTTT AGCGACGTGC
ACGGGCGTGC TCACGATGCA CTGGCTTGAA CAGCTCGATT TCGACGCCGG AGACTTCGCG
CGCGCGCGGT TCGGCACCCA TCGCGACTTT GGATTGTACA CGGACAGCGA GGCGGATTAC
TCAAAGAATT ATTGGTGGTA CTTTTGGGAG GTACCGATTT TCATCGCCAT GGGTGTGTGC
GGTGGTTTAC TCGGCGCTGC GTTCGTGAAC TTGAACGTGA AAATCACGCA GTGGCGCGCC
AAGTACATTC CCGTGACGGA TCGGAGAAAG CGCTTGCTCG AAGTGATCGC CATTGCGGGG
ATCACGTCGA CGCTATTTTT CTTCTTCATG TCCGTGTCGC CGTGTAAGGA TATCCCTCTG
CCGTTGCGAG CTGGGACGGC GGACAGTCTC GACGACATGT CCAATTCGAG CTTTGAGTAC
GGGGTGGAGA CGAGAGACGA GATTCGCAAC GATTTCTTCA AGCAGCTGTA TTGCCCGGAT
GGTCAATACT CGGTGTACGG GCAATTATTT TACAACCCAC TGGCGACGTC GTTCAAGTTT
TTGCTCCATC TCGGCGAAGT CGGCGAGTTT GGCGGTGACA GTGCGCACCC TTTCCCGATC
GGTGCGTTGA TATGGTACTT CCTCTTGACG TTCTGTTTGA TGACGGTGAC GTACGGCATC
GGAGCCCCGA CGGGGCTCTT CGTGCCGTCG CTCGCCGTCG GGGCTTCTTT CGGTCAACTC
TGCGGACGCG TGGTGGCACA CATCGCCGCT TCGCGAGGAA GCGATGTGAA GATTAACTTG
CACGCCTACG CCATCATCGG CGCGGCGGCA AATCTCGGCG GGGCGACGAG AATGACCATT
TCGATCACCG TTTTAGTCAT GGAAACGACG GGTTCGATGC AGTTAATTAT TCCACTCATG
TTGACGATTT TCACCGCCAA GGCCGTGGGT GATCGATACG GGCACGGCAT TTACGACACG
CACATCAAAA TCCGCGGAGC GCCGTTCTTG GAAGAGCCCG AGCTCGCTGG ACCGACTGGA
GACAAGCTTC GAGTGAACGA AGTCATGAGC GACGAGTTGG TGACGCTTCA GCCCGTGATG
CGCGTGAAGG ATTTGCTACA GATCCTCACT CAAACCCCGC ACGGGGCGTA TCCAGTGACC
GAACACCCGC CCGCGTACGC GGGCGAAGAT TTCGAGCTGC ACGGCTCCAT CACGAGGAAT
CTGTTGCTCA AGATGCTCCT GCACAGAATT TCCTTCGTCG ACGCGAGCGG CGGTGGACGC
GTGGGCGGAG ACAATCTGTT CACCAACCCG CGCGAACGCG ACGATTTGCT CGAGCAATTG
AAGCAAATTC CGTTCAAAGT GCCGAGCGCG CGCGAGGTGG CCCATCGCGT GTCGGAAGAA
GACATTCGCA CGATGTCCGT CGACTTGCGA AGTTTCATGC AGCGCCACCC GTTCCTCGTG
CACGCCGACG CGCGCGTCAG CCGCGCCTAC CGTCAATTCC GAACGATGGG TTTGCGTCAC
ATGTACGTCA TGCCTTCCCG CCCTCGCGTC GTCGGCTTGC TCACGCGCAA AGACATCATT
CAAGAGCGCA CGAGCCTGAC GTTGGGCTTG TACGCGCGCG GCTTGGCGCG TCCGCCCGCG
CGACCCGTCT CCCGCACGTC GGAGCCCCCC CACGACGCTC GCGACGCCGC CGTCGCGTCC
ACCGCCACCG CCCTCACCCC GAGCGCCGCC ATCGACGACG ACGACGACGC CAAGCTCCCC
TACATTCCCT ACTACGCCAA CAACTCGGCG ACGACGGACG ACGGCGACGA CGCCGCCGCG
AGCGCTCGCG CGTCCCACGC TTCCGACCTC GACGCCGCGC GCGCGTCCAA CCCATTCATC
GACGCCGCGT CGACGCTCCG TCGTCGATGA GCGTCGAGAA TAGCGCGCAT CAGCATCGTT
GTAACGCCGC GCGTTCGC
 
Protein sequence
MAAFESHDYD PIDNDLEEDA LRGRTREDYK RERAWKWATS VMIGAVMGIV AFVIDGLVDK 
LNLFRYGVIG DKVGTDGYAR FVAWLLHAVV SCAFAAVAGG LVSYVEPLAA GSGIPELKTY
LNGVHLKGLL RLKTVVAKLG GISFSIGAGL IAGKEGPFVH GGGLVGGGLS AFGSNTLGFK
LKYPAWFRDD RHKRDFVAIG TATGVAVAFA APIGGMLFTV EEGASFYNSD MLWRGFLATC
TGVLTMHWLE QLDFDAGDFA RARFGTHRDF GLYTDSEADY SKNYWWYFWE VPIFIAMGVC
GGLLGAAFVN LNVKITQWRA KYIPVTDRRK RLLEVIAIAG ITSTLFFFFM SVSPCKDIPL
PLRAGTADSL DDMSNSSFEY GVETRDEIRN DFFKQLYCPD GQYSVYGQLF YNPLATSFKF
LLHLGEVGEF GGDSAHPFPI GALIWYFLLT FCLMTVTYGI GAPTGLFVPS LAVGASFGQL
CGRVVAHIAA SRGSDVKINL HAYAIIGAAA NLGGATRMTI SITVLVMETT GSMQLIIPLM
LTIFTAKAVG DRYGHGIYDT HIKIRGAPFL EEPELAGPTG DKLRVNEVMS DELVTLQPVM
RVKDLLQILT QTPHGAYPVT EHPPAYAGED FELHGSITRN LLLKMLLHRI SFVDASGGGR
VGGDNLFTNP RERDDLLEQL KQIPFKVPSA REVAHRVSEE DIRTMSVDLR SFMQRHPFLV
HADARVSRAY RQFRTMGLRH MYVMPSRPRV VGLLTRKDII QERTSLTLGL YARGLARPPA
RPVSRTSEPP HDARDAAVAS TATALTPSAA IDDDDDAKLP YIPYYANNSA TTDDGDDAAA
SARASHASDL DAARASNPFI DAASTLRRR