Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_50387 |
Symbol | |
ID | 5003887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009363 |
Strand | - |
Start bp | 509784 |
End bp | 510839 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | |
GC content | 65% |
IMG OID | 640419308 |
Product | predicted protein |
Protein accession | XP_001419827 |
Protein GI | 145350889 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.142215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0213314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCGT CCCGTCGCAC CCTCGACCGC TTACCCGCGG TCGACCAAAC CCTCGCCGCC AAGCTCGAGT CCCGAGGATG TCGCACCGCC GAAGACGCGC TCTATCGCGC CCCGTTGGAC GTCGTCGAGC TCGCCGACGT TTCGATGCAC CGCGCGCGAC AGTTCATAAT CAGCGTCGCG AAAGCCGTCG CGCCGACGCC CACGACGGCG CTCGACGCGC TGCGAAGGTC GCAATACGTC CCACTCGTCA TCGAGGACGT GGACAAAGCG CTCGGCGGTG GGCTGCGCGT CGGCGCGGTG ACGGAGGTGG TCGGCGCGGC GGGCGCGGGA AAGACGCAGC TGTGTCTCGC GGCGTGCGCG AGCGCGGCGG CGCCGGCGCG CGTCGGTGGA CGCGATGGGG GGGTGATTTA CGTCGACGCC GAACGGAAAT TCAGTGGGGC GCGTCTGGCG GAGATCGCGC GCGAGAAATT CCCCGGGGCG TTTGAGGATG AGGAAAGCGT GCACGCGCTC GCGCGCAGAG TGCACGTGGT GACGCCGACG AGTCTGACGG ATTTGAATAA ACGATTGGAC GCGTTGGAGG AGGCGATCAT CGATCACAAG GTGCGGTTGG TGATCATAGA CTCCATCGCG CATCTCGCGC GCGCGGAGTT CGGACGAGAG AAGGTGGTGC AGCGGCAGAG CGCGTTGGGC GCGGTGGCGT CGACGCTCAA GCGGCACGCG GAGAAGCACG CGCTCGCGGT GCTCGCGGTG AATCAGGTGA CGACGAAAAT TGGAACGTTC GCTCGGCACG CGAGCGATGG CGGTGATGAT GTCGCGGATG AATCGAGTGG AATCACCGCC GCGCTCGGCA CGAAGTGGGC GCACTGCGTG AACACGCGCA TCGCGCTCGA GGTGTTGGAA GACAGACGAG CGTTGAAAAT CGTAAAGAGC CCGCTCGCGC CGTTGACGTC TTTCGAGTAC CGCGTCGACG CGTCTGGGAT TCGTGTTTCG GGGAAATCTG ACGCAAAGGA CGTGCGCGCG TCGGAGGCAA ACGTTCACTC CACTATTGGG AAATGA
|
Protein sequence | MSASRRTLDR LPAVDQTLAA KLESRGCRTA EDALYRAPLD VVELADVSMH RARQFIISVA KAVAPTPTTA LDALRRSQYV PLVIEDVDKA LGGGLRVGAV TEVVGAAGAG KTQLCLAACA SAAAPARVGG RDGGVIYVDA ERKFSGARLA EIAREKFPGA FEDEESVHAL ARRVHVVTPT SLTDLNKRLD ALEEAIIDHK VRLVIIDSIA HLARAEFGRE KVVQRQSALG AVASTLKRHA EKHALAVLAV NQVTTKIGTF ARHASDGGDD VADESSGITA ALGTKWAHCV NTRIALEVLE DRRALKIVKS PLAPLTSFEY RVDASGIRVS GKSDAKDVRA SEANVHSTIG K
|
| |