| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_35139 |
|---|
| Symbol | CYN19-2 |
|---|
| ID | 5003550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009363 |
|---|
| Strand | + |
|---|
| Start bp | 184073 |
|---|
| End bp | 184591 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640418971 |
|---|
| Product | Peptidyl-prolyl cis-trans isomerase, cyclophilin-type |
|---|
| Protein accession | XP_001419515 |
|---|
| Protein GI | 145350227 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.000900275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.301882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACC CGATCGTGTT CTTAGACATA GCCATCGGCG CTCGACCGAT CGGACGCATC
GAGATCGCGC TCGACGTCGC GGCGGCGCCG AAGACGTGCG AAAACTTTCG CGCGCTGTGC
GTGGGCGAAC GCGCGTCGCC GTCGACGCGA AAACCGCTGC ACTACGCGTC GAGCGTCGTG
CACAGAGTCA TCCCGGGATT CATGATTCAG GGCGGGGACT TCACGAATCA CAACGGCACG
GGAGGCGAGT CCATCTACGG GCGAACGTTT CGGGATGAGA ACTTCACGCT GAAACACGAC
GCGCGCGGCG TCGTCTCCAT GGCGAACGCC GGTGCGAACA CGAATTCGTC GCAGTTCTTC
ATCACGCTCG CGGCGACGCC GCATCTCGAC GGTAAGCACT GCGCGTTCGG GCGCGTGCTT
CGCGGGATGG ACGTCGTCGA CGCCGTCGAA GCCGTCGGTT CGCAGTCGGG CGCGACGTCG
GAAGCCGTCG CGGTGACGGA CTCGGGACAG CTCAGCTGA
|
|---|
| Protein sequence | MDDPIVFLDI AIGARPIGRI EIALDVAAAP KTCENFRALC VGERASPSTR KPLHYASSVV
HRVIPGFMIQ GGDFTNHNGT GGESIYGRTF RDENFTLKHD ARGVVSMANA GANTNSSQFF
ITLAATPHLD GKHCAFGRVL RGMDVVDAVE AVGSQSGATS EAVAVTDSGQ LS
|
|---|
| |