| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_35070 |
|---|
| Symbol | |
|---|
| ID | 5003561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009363 |
|---|
| Strand | + |
|---|
| Start bp | 337727 |
|---|
| End bp | 338980 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 640418982 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419562 |
|---|
| Protein GI | 145350327 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
|---|
| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0746786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAC TGACGACGAC GCGCGCGGTG TGCGATGACG CGCAGATGCC GGCGACGCAC
GCGAACGCGA GCGGGGCGAC GACGACGAGC GAGGGATCCT CGACGACGAC GGATCTGTAC
GCGCGACTCA AGTCGCTTCA ACGCGAACTG GAGCTGGTGG AGATTCAAGA GGAGTACATC
AAGGATGAAC AAAAGAACTT GAAGATTGAA TTGCTCAGGG CGCAGGAAGA GGTGAAGCGG
ATACAGAGCG TGCCGTTGGT GATTGGACAG TTTTTGGAGA TGGTGGACGC GGAGACGGGG
ATCATATCGT CGACGACGGG GTCGAATTAT TACGTGCGGA TTTTGTCGAC GCTGAACCGG
GAGCTGTTGA AACCGTCGAG CTCGGTGGCG TTGCACAGAC ATTCGAACGC GCTGGTGGAG
ATTTTACCTC CCGAGGCGGA TTCGTCGATT TCTTTGTTGA GCGACGCGGA ACGGCCGGAT
GTGAAGTACA GCGACATCGG GGGGGCGGAT GTGCAAAAGC AAGAGATTCG CGAGGCGGTC
GAGCTTCCGT TGACGCACTT CGATTTGTAT AGGCAGATTG GAATCGATCC ACCGCGTGGG
GTCTTGCTGT ACGGACCACC CGGGACGGGG AAAACGATGT TGGCCAAGGC GGTGGCGCAC
CACACCACGG CGGCGTTTAT TCGCGTCGTC GGGAGCGAGT TCGTGCAGAA GTACCTCGGC
GAAGGGCCGA GAATGGTGAG AGATGTGTTT CGATTGGCGA AGGAAAACGC CCCAGCGATC
ATCTTCATCG ACGAGGTCGA TTCCATCGCG ACTGCGCGTT TCGACGCGCA CACCGGCGCG
GATCGTGAGG TGCAGCGTAT TTTGATGGAG CTCTTGAACC AAATGGACGG ATTCGATCAA
ACGGTCAACG TCAAAGTAAT CATGGCGACG AACCGTGCGG ATACCCTCGA TCCGGCGTTA
TTGCGCCCCG GTCGTCTCGA TCGAAAGATT GAGTGCCCGC ATCCCGATCG TCGTCAAAAG
CGTTTGGTGT TCCAGGTGTG CGTGAACAAG ATGAGCCTCA GCGACGAAGT AGATTTGGAG
GATTACGTCA GTCGACCGGA CAAGATCTCC GCCGCGGACA TTCGCTCCAT CTGCCAAGAA
GCCGGGTTGC AAGCCGTTCG GAAGAATCGA TACGTGGTTT TACCGAAAGA CTTTGAAGTC
GCGTACAAGA CGAACGTGCG CAAACCTGAC AACGACTTTG AATTTTACCG ATAG
|
|---|
| Protein sequence | MERLTTTRAV CDDAQMPATH ANASGATTTS EGSSTTTDLY ARLKSLQREL ELVEIQEEYI
KDEQKNLKIE LLRAQEEVKR IQSVPLVIGQ FLEMVDAETG IISSTTGSNY YVRILSTLNR
ELLKPSSSVA LHRHSNALVE ILPPEADSSI SLLSDAERPD VKYSDIGGAD VQKQEIREAV
ELPLTHFDLY RQIGIDPPRG VLLYGPPGTG KTMLAKAVAH HTTAAFIRVV GSEFVQKYLG
EGPRMVRDVF RLAKENAPAI IFIDEVDSIA TARFDAHTGA DREVQRILME LLNQMDGFDQ
TVNVKVIMAT NRADTLDPAL LRPGRLDRKI ECPHPDRRQK RLVFQVCVNK MSLSDEVDLE
DYVSRPDKIS AADIRSICQE AGLQAVRKNR YVVLPKDFEV AYKTNVRKPD NDFEFYR
|
|---|
| |