Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_35045 |
Symbol | |
ID | 5003784 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009363 |
Strand | + |
Start bp | 379319 |
End bp | 380034 |
Gene Length | 716 bp |
Protein Length | 214 aa |
Translation table | |
GC content | 62% |
IMG OID | 640419205 |
Product | predicted protein |
Protein accession | XP_001419578 |
Protein GI | 145350364 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.132422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.23655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTAACG ACGAACCGAC GCCTGATGGT TTGCTTCGCT CGGACTCCTT GCTCAGTCCG GCTTGGCGAA TGATGCTGCT GTCGGATGGT TCGGTGACGG TGCGTCGAAT TCTCGACGCC TTTGTATTTC ACCTTCAGAC TAACATTCGC ATCGTGTGTT CGCCTCACAG CGTCACTTAA AGCTGCTCAC CGGGCGTGCT GATGTTAAAA CGGATGTCCT GTGGCAGGGT AAGATCGATC TCGACCACCG AGGTGCGCGC GAGATCGGCG TTCCGGACGA CGTCCACAAG CGACTCCTCG CCGCGTCTTC GGGCACGCTC CTACAACGCG AGGTGGACCT GTGTGATGCA CACGGTGATC CGCTGTGTTA CGCCGCGAGC TGGTGGAACA CGAACACCTC CGATACGATC GTCCTCGACA CCGACGCCGA TAACGCGTAC GGTGCGCTCG ATCGTCCGGT ATGGCTCAAA CTCGCCGAGG ACAAGACGGA GCTCTTTCGC GAAGTCCGCC GCGTCTACCG CGGTCAATCC GAGCGCCTAT CCTCAGCCTG GGGCCTTCCC ACCGACACCT ACTTCTGGGG TCGTCACTAC ATCTTCTGGC TCGCTCGCAA ACCGCTGTGC GTGATCCACG AAGTCATGAG TCCCGCGCTC GAGACGTACC TCGGCCCGGC CGCGCCCGCG CCTCGCGCGC GTCGCGCGCG CTCGCGCCGA ACCTAA
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Protein sequence | MCNDEPTPDG LLRSDSLLSP AWRMMLLSDG SVTRHLKLLT GRADVKTDVL WQGKIDLDHR GAREIGVPDD VHKRLLAASS GTLLQREVDL CDAHGDPLCY AASWWNTNTS DTIVLDTDAD NAYGALDRPV WLKLAEDKTE LFREVRRVYR GQSERLSSAW GLPTDTYFWG RHYIFWLARK PLCVIHEVMS PALETYLGPA APAPRARRAR SRRT
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