Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_33594 |
Symbol | |
ID | 5003820 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009363 |
Strand | - |
Start bp | 474842 |
End bp | 475464 |
Gene Length | 623 bp |
Protein Length | 175 aa |
Translation table | |
GC content | 71% |
IMG OID | 640419241 |
Product | predicted protein |
Protein accession | XP_001419818 |
Protein GI | 145350869 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5052] Protein involved in membrane traffic |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.112837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAGCG CGGCGATCGC CGACGCGGTG CTCCGCGTCG TCGTCCTGCT CTACCCGGGG TACCTGACGT ACAAGACGCT CGAGCACGAC CGCAAGCGCG CGGACAACGC GCGCGGGTGG TGCGTGTACT GGGTCGTCGC GAGCGCGTGG ATGGCGGCGC AGCCGGCGCT GGATCGCGCG TTCGGGGGAC GAGCGGTGAT GTATTGGGAG TGTAAGGTGC GCCGGTGACC GCCGGAACGG GACGGGACGC GCGCGACGCG CGGACGCGCG CGGAGGATTC GAACATCGAA GGACTGACGC GCGCGGCGCA GGTGGCGTTT AGCGTCTATC TCTGGCATCC GAGGTTTCAG GGCGCGCTGT ACGTGTACGA TAGGTTCTTA GCGCCGATCT TGGTCGCGAA CGAGTCGCGC GTCGATCACG CGCTGGCGAC GACGTTCGAG CGCGTCGGGA CGCACGGGGG CGCGGCGCTC GCCGCCGCGC GGCGGTTCGC GCGACGGTAC GCGAACGACG CGCTCGCCAA GGCGACCGAG GCGCAGTTAC AGCAGCAAGC CGACGCGCCC GCGGCGAGCG GACGCGCTGA TAGAGTAGTC ACCGCGCGCA CCGCGAGGGA GGTGCGCTCG TAG
|
Protein sequence | MPSAAIADAV LRVVVLLYPG YLTYKTLEHD RKRADNARGW CVYWVVASAW MAAQPALDRA FGGRAVMYWE CKVAFSVYLW HPRFQGALYV YDRFLAPILV ANESRVDHAL ATTFERVGTH GGAALAAARR FARRYANDAL AKATEAQLQQ QADAPAASGR ADRVVTARTA REVRS
|
| |