| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_33543 |
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| Symbol | |
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| ID | 5003576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009363 |
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| Strand | + |
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| Start bp | 384565 |
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| End bp | 386921 |
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| Gene Length | 2357 bp |
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| Protein Length | 771 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640418997 |
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| Product | predicted protein |
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| Protein accession | XP_001419581 |
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| Protein GI | 145350370 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5047] Vesicle coat complex COPII, subunit SEC23 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0336143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.164519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCA ACGAATTGGA ACGACGCGAG GGCGTGCGGT TGTCGTGGAA CGCGTGGCCG
TGCTCGCGGA TCGAAGCCAC GCGCGTGGTG CTGCCGATCG GCGCGCTCGT GACGCCGGGA
CGCGATCTCG GGGACGCCGC GCCGACGCTG CCGTACGAAC CGGTGGTGTG CGAGGGGTGC
CAGGCGGCGT TGAATCCGTA CTGCTCGGTG GATTACTACG GCAAGACGTG GCGATGCTCG
CTGTGCGATG GGCTGAATAA ATTGCCGAGG AATTACGAAC AGATCAGCGA AAATAACCTG
CCGGCGGAGC TGTTTCCGAC GTACACGAGC GTGGAGTACA CGATGACGAA TAAGACGCCG
ACGGCGCCGT GCTTCGTGCT GTGCGTGGAT TGCGCGTGCG GGAGCGCGGA GGAGTTGCAG
GACGCGAAGG ACAGCGTGAT GCAGTTGGTG AGCTTGTTGC CGGAGGATGC GTTCGTGGGG
TTGGTGACGT TCGGGTCGAC GGTGCGCGTG CACGAGTTGG CGGAGACGAA CGGGGCGATG
CGGCGATCGT ACGTGTTTCG CGGGACGAAG GATTGCGAGC AGGAAGATTT GCGCAAGATG
TTAGGGCTGG ATTTCAATCG TCAGCGCGCG GGGATGAATG GAATGAATGG AATGAACGGC
GCTGCGGCGA TGATGCCGAA TGGCGTGGAC GCCAAGCCGG TGAGACGATT CGTCGCGCCC
ATCAGCGAGT GCGAGTTCAC GCTGCAGAGC GTCCTCGACG AGGTGACACT GGACGAGGAG
AAGACAGAGC GCGGGAAGCG CGCGCTACGG GCGATGGGTG CGGCTATCAG CATCGCCGCC
GGACTTTTAG CCGAATCGCA CTCGTCGCAA GGGGGTCGTG TGCTCACGTT CACCTCCGGG
CCGTGCACCG TAGGGCCTGG CGCCGTCGTG GGGACGGATA TGAGCGAGAA TTTGCGCTCG
CACCAAGACT TGGAAAAGAA CGCGGCTAAG CATTACAAGG AGGCGTGTAA AGTTTATAAC
GCGATCGGAA TTCGACTAGC AACGAATTCT CATACATTGG ACGTCTTCGC GTGCTCTCTG
GATCAAGTCG GACTGGCGGA GATGAAAATA GCGGTGGATC AAACAGGCGG GAACATGATT
CTCGCCGAGC AGTTCCGCGC AGAGACTTTC AGGCAATCAT TAGCGAAGAT GTTTGCGAGA
GATCCGAAAA CTGGTGCCTT GGAGATGAAG TTCAACGGAA CTTTTAGCGT GTTCTGCACG
CCGCAAATCA TGGTGTGCGG CGCCATCGGG CCAATTAGCG CTTTGGCGGT CAAGTCGCAG
CGAATTAGTG AAAACGAAAT CGGTTTGGGA CAAACCACAT CGTGGCGCAT GTGTTCGTTC
ACGCCCACTT CAACCATAGC GGTCTACTAC GAAGTCGTCA ACCAGCACAG CAATCCGATC
CCCAACGGGC AACCATTCTT TCTGCAGTTT TGCACGAGAT TTAAGACGAG TGACGGGCAG
ATTCGCCTGC GAGTCACCAC CGTGGCGAGA CGCTGGGTCG AAAGTAGTTT GGCGCCCGAA
ATCGTGGGCG GGTTCGACCA AGAGGCGTGC GCTGTACTCA TGGCGAGAAT TGCAACGTTT
AGAACTGAGA ATGAAGAGTC CTTCGACTTG TTGAGGTGGC TCGATCGCAC ACTCATTCGC
GTTGGCGCAA AGTTTGGGGA ATATCAGCGA GACGCGCCGG ATAGCTTCCG CATGCCACCG
AGCATGTCCA TCTATCCACA GTTCATTTTC CACTTGCGCC GCTCACAGTT CTTACAGACC
GCGAATAACT CACCGGATGA AACAGCGTTT TATCGCATCA TGCTCTCTCG CGAGACGGTG
ACAAACTCGT TGGTGATGAT TCAACCGACG CTGTTGAGTT ATTCCTTCAA CGGCCCACCC
CAACCGGTGC TTTTGGACGT CAGCGCAATC ACGCCCGATA CGATCTTGCT GTTAGACTCA
TACTTCTTGA TAGTCGCACA TAGAGGCAGC ACGATCGCGG CGTGGCACAA AGCCGGATAC
CAGGATCAAC CAGAACACGA GGCGTTCCGC GCCCTGCTCG CGGCGCCGGT ACGCGACGCG
AAAGCTTTGG CGGCAGATAG ATGTCCGACG CCGCGTCTCG TGGAGTGCAA TCAAGGGGGG
TCGCAGGCGA GGTTCTTGCT CGCCAAGTTG AACCCTTCGG CAACGCACAA CACCGACCTC
GGGTACGGTC AAAGTGGTGG AGAGATCATC TTCACCGATG ATATAAGCAT GAACGTATTC
GTCGACCATT TAGCCAAGCT CGCAGTTAGT TCGTAGATCA TATCATCAAT GAATGCGCAA
GTACATTAAT CACTACA
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| Protein sequence | MDFNELERRE GVRLSWNAWP CSRIEATRVV LPIGALVTPG RDLGDAAPTL PYEPVVCEGC
QAALNPYCSV DYYGKTWRCS LCDGLNKLPR NYEQISENNL PAELFPTYTS VEYTMTNKTP
TAPCFVLCVD CACGSAEELQ DAKDSVMQLV SLLPEDAFVG LVTFGSTVRV HELAETNGAM
RRSYVFRGTK DCEQEDLRKM LGLDFNRQRA GMNGMNGMNG AAAMMPNGVD AKPVRRFVAP
ISECEFTLQS VLDEVTLDEE KTERGKRALR AMGAAISIAA GLLAESHSSQ GGRVLTFTSG
PCTVGPGAVV GTDMSENLRS HQDLEKNAAK HYKEACKVYN AIGIRLATNS HTLDVFACSL
DQVGLAEMKI AVDQTGGNMI LAEQFRAETF RQSLAKMFAR DPKTGALEMK FNGTFSVFCT
PQIMVCGAIG PISALAVKSQ RISENEIGLG QTTSWRMCSF TPTSTIAVYY EVVNQHSNPI
PNGQPFFLQF CTRFKTSDGQ IRLRVTTVAR RWVESSLAPE IVGGFDQEAC AVLMARIATF
RTENEESFDL LRWLDRTLIR VGAKFGEYQR DAPDSFRMPP SMSIYPQFIF HLRRSQFLQT
ANNSPDETAF YRIMLSRETV TNSLVMIQPT LLSYSFNGPP QPVLLDVSAI TPDTILLLDS
YFLIVAHRGS TIAAWHKAGY QDQPEHEAFR ALLAAPVRDA KALAADRCPT PRLVECNQGG
SQARFLLAKL NPSATHNTDL GYGQSGGEII FTDDISMNVF VDHLAKLAVS S
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