Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_33472 |
Symbol | |
ID | 5003658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009363 |
Strand | + |
Start bp | 267986 |
End bp | 268498 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | |
GC content | 62% |
IMG OID | 640419079 |
Product | predicted protein |
Protein accession | XP_001419541 |
Protein GI | 145350281 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.403961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.102775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGG TGCACAAGGG CGAGGGGAAC AGGGCGTTTC AAGAGAAGCG ATTCGAAGAC GCGGTGGCGT CGTTTTCGCG CGCGGCGGCG CTGGAGCCGA AAAATTGGGT GTTTTTTAGT AATCGGAGCG CCGCGTACGC CGAGCTTGGG CGGTACGACG ACGCGTTGGA TGACGCGAAG GAGACGATTC GATTGAACTG CGAGTGGACG AAGGGGTACG TTCGACTCGC GACGGCGTGC TCGGCGCTGG GTAGGTTGTC CGAGGCGACC GCGGCGTGGA GGAGGGCGTG CGAATTGGAC GACGAGAACG CGTCTTTGCG GGAATCGCTC GCAAAAGCGG AAGCGGCGGA AGAGTCGTCC TTGAAGGAAG GCAAGTTCAA GTTTCAAGGG TCGAAGCGTA AAGAGACGGC CGGCGACGGT GAAGACGTCG CCGGAGGCGA TGTGACGGAG GCGAAGAAGA AGAAAAAGAA GCCGCCTCCC GCGACGCTGT CGTTTGCGGA TGACGACGGG TGA
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Protein sequence | MAAVHKGEGN RAFQEKRFED AVASFSRAAA LEPKNWVFFS NRSAAYAELG RYDDALDDAK ETIRLNCEWT KGYVRLATAC SALGRLSEAT AAWRRACELD DENASLRESL AKAEAAEESS LKEGKFKFQG SKRKETAGDG EDVAGGDVTE AKKKKKKPPP ATLSFADDDG
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