Gene OSTLU_33472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_33472 
Symbol 
ID5003658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp267986 
End bp268498 
Gene Length513 bp 
Protein Length170 aa 
Translation table 
GC content62% 
IMG OID640419079 
Productpredicted protein 
Protein accessionXP_001419541 
Protein GI145350281 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.403961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.102775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG TGCACAAGGG CGAGGGGAAC AGGGCGTTTC AAGAGAAGCG ATTCGAAGAC 
GCGGTGGCGT CGTTTTCGCG CGCGGCGGCG CTGGAGCCGA AAAATTGGGT GTTTTTTAGT
AATCGGAGCG CCGCGTACGC CGAGCTTGGG CGGTACGACG ACGCGTTGGA TGACGCGAAG
GAGACGATTC GATTGAACTG CGAGTGGACG AAGGGGTACG TTCGACTCGC GACGGCGTGC
TCGGCGCTGG GTAGGTTGTC CGAGGCGACC GCGGCGTGGA GGAGGGCGTG CGAATTGGAC
GACGAGAACG CGTCTTTGCG GGAATCGCTC GCAAAAGCGG AAGCGGCGGA AGAGTCGTCC
TTGAAGGAAG GCAAGTTCAA GTTTCAAGGG TCGAAGCGTA AAGAGACGGC CGGCGACGGT
GAAGACGTCG CCGGAGGCGA TGTGACGGAG GCGAAGAAGA AGAAAAAGAA GCCGCCTCCC
GCGACGCTGT CGTTTGCGGA TGACGACGGG TGA
 
Protein sequence
MAAVHKGEGN RAFQEKRFED AVASFSRAAA LEPKNWVFFS NRSAAYAELG RYDDALDDAK 
ETIRLNCEWT KGYVRLATAC SALGRLSEAT AAWRRACELD DENASLRESL AKAEAAEESS
LKEGKFKFQG SKRKETAGDG EDVAGGDVTE AKKKKKKPPP ATLSFADDDG