Gene OSTLU_33378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_33378 
Symbol 
ID5003531 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp122213 
End bp123914 
Gene Length1702 bp 
Protein Length398 aa 
Translation table 
GC content53% 
IMG OID640418952 
Productpredicted protein 
Protein accessionXP_001419715 
Protein GI145350653 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.111341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGTCG AGGATTTTGA ACCGCTGAAG TTGATCGGGC GAGGGGCTTT CGGTGCGTGA 
ACGACGCGAC GCGACGCGAC GCGGACGACG ACGCGCGCGG GAATATTCCG GGAGGACGCG
GGACTGACGA CGGGTGGGAT TCGTTTCGCG CGCGCGAACA GGGGAGGTGC GGTTGGTGCG
ACAGAAGAGC ACGGGGGAGA TTTTCGCGAT GAAGAAGCTG AAAAAGTCGG AAATGGTTCG
GCGCGGGCAA GTCGATCACG TCAAGGCGGA GCGAAACTTG CTCGCCGAGG TGAACTCGCG
CGCGGTGGTG ACGCTGTATT ATTCGTTTCA AGACGATCAA TTCTTGTACC TCGTGATGGA
ATATTTACCG GGTGGAGACG TGATGACTCT GTTGATTCGA CGCGATACGC TCACGGAGGA
AGAGACGCGG TTTTACTTGG CGCAGACGGT GGCGGCGCTG GAGACGATTC ATCGACACAA
CTTTATTCAC AGAGACATCA AACCGGACAA CTTGTTGCTC GACAAGGATG GTCACATGAA
GTTGAGCGAC TTCGGATTGT GCAAACCCAT CGATCCGGCG TATCAGCAGG CGGTTCTCCC
GGAAATCTTG GAGAACGAAG CGGCGATGAG TCGAGACGGC GAGGGCAATT TGCCAAACAC
GATCGAGACG GATCAAAAGC GCGCAGAAGA GCTCGCGAAC TGGCAGAAGA ATCGACGTCG
GTTGGCGTTC AGCACAGTTG GTACGCCGGA CTACATCGCC CCAGAAGTTC TCCTGAAGAA
AGGATACGGC TTGGAGTGCG ATTGGTGGAG CGTCGGTGCT ATCATGTTTG AAATGCTCAT
GGGTTACGCG CCGTTTTACA GCGACGAGCC GATGACGACG TGCCGTAAAA TCGTGCACTG
GAGACACCAC TTGAGAATTC CAGACGACGC GACGATCTCT CCCGAAGCGC GCGACTTGAT
CGAACGTCTG TTATGCGACG TCGATCAGCG TTTAGGAACG AGCGGAGGCG TGGAAGAGAT
CAAATCGCAC AAATTTTTTA GCGGCATCGA CTGGGACACT CTCTACACGA GGAAGCCACC
CCATAGTCCC GTCGTTTCGC ATCAATTGGA CACTCGTAAC TTTGAAGATT TCGAAGAGGA
CGAGAGCATG CGAAAGAAGA GTGAACTTGG GGAAACGGAT GCGGGCAAAG ATTCCAACTT
TGTCGGTTAC ACGTACAAGA ACGTCGAAGT CGTCGGCGAC CAAGTCGTCA AAGTGAATCC
GACGCGACCG TCGTTGACGA CGCTTTTCCC TTCGACTAAG AAGTAGTAGT TTTAATTCGT
ATGTAATGCG CGCGCATCGT AATGAAGGCA ACGACGCTGG TGTTCTTGGG TGATACAGTA
CATCTGTTTT TATTCAACTC AAACTAATAG ATAAACATTA TTAGGGAGGT GATGGTACAC
TGGCACTCGA TGATGTTGAA TAGTCCATCG TGCTCAGATT TTGCGCGCAA GCGCTCGCGA
GCGCCGCTCT TCTGCGTAAA TACGGTATTT TTGCTATTTT ATTGTTGCTT TCTTCCGAAG
CGGAACTTGG AGAAAAAAGA CTTGCTCGGA GGTTTCGCCA AGGTTTCGAT GACTTCTTCC
GGAGAATCAC ACGCTTCGAG TAAAGGCTGC AAATCTCTAA AACGAGGCCG CGACTGCGGC
ACGGTTTTCC AACAATTCTG CA
 
Protein sequence
MCVEDFEPLK LIGRGAFGEV RLVRQKSTGE IFAMKKLKKS EMVRRGQVDH VKAERNLLAE 
VNSRAVVTLY YSFQDDQFLY LVMEYLPGGD VMTLLIRRDT LTEEETRFYL AQTVAALETI
HRHNFIHRDI KPDNLLLDKD GHMKLSDFGL CKPIDPAYQQ AVLPEILENE AAMSRDGEGN
LPNTIETDQK RAEELANWQK NRRRLAFSTV GTPDYIAPEV LLKKGYGLEC DWWSVGAIMF
EMLMGYAPFY SDEPMTTCRK IVHWRHHLRI PDDATISPEA RDLIERLLCD VDQRLGTSGG
VEEIKSHKFF SGIDWDTLYT RKPPHSPVVS HQLDTRNFED FEEDESMRKK SELGETDAGK
DSNFVGYTYK NVEVVGDQVV KVNPTRPSLT TLFPSTKK