Gene OSTLU_25081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_25081 
Symbol 
ID5003841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp559157 
End bp561586 
Gene Length2430 bp 
Protein Length802 aa 
Translation table 
GC content60% 
IMG OID640419262 
Productpredicted protein 
Protein accessionXP_001419635 
Protein GI145350485 
COG category[R] General function prediction only 
COG ID[COG5210] GTPase-activating protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.315559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGG TGCGAGCGTC GACGAAGCTG GCGACGCGGG CGCGGTACGC GGCGATCGAC 
GAGGACGCGG GCGAGGAGGA CGCGGCGAGC TTCGTCGACG CGGATGATCG AATGCCGTTC
GGTCGCGCGA GTGATTTCCC GCCGTCTTAC GGCGAGGCGA AGGCGTTGAA ACGCGTTGAG
GGCGAGGCGT CGGTGAGCGG GGAGCCGTCG AGCGAGGAGG AGGATCTCGA GGCGGCGACG
CCGAGGGACG AACTCGGATT TGAAGTTCCG GAGAGTCTGC GGGAGACGCA CGAGGCGCGA
CGCGCGGTGC GCGCGGATCA CAGGATTCGA CAGATGGAAT ATTTAGAGGT GTATCGGAAC
GTACCGGAGA AGCAGAGGGG CGTGGGCGGA GACGCGTGTT TGGCGCTCGC GGTGAATGGA
ATTCATCCGG ACCACCGCGC GGAGATTTGG GCGGAAAAGC TCAAGGCGCA TGTGAAGCAG
TACTCGAGTT CGCATTCGTT TTATCAGTAC TTGGAACTCG GGCAGGCGTC GTTGAGCGAC
GCCGAGCGAG AGCTCATCGA GGGTGACGTG CGCGCGGCGT GCCCGACGCA TCCACTGCTT
CGCTCGGATG TCGCGGAATC GACGTCCAGA TCGACGTCTT CGTCTTTCAC GCACGCGTTC
GCGAACACGG CGAGCGAGGG GTTCGTGCTC GGTGGAAAGG GCGTCGCATT TCAAGATTTC
CCTAGGACGC TGATAAACAT ATTGATAGCC GCCGCCGAGC GGAGTCCGCA CGGGTACTGC
TCAGGATTCG TCGTTCCCGC CGCCGTGATG CTGTTGCTCA CCGAAGACGA AGAGGCGTCG
TTTTGGATGC TCGCTGGGTT CACGGAAGAC GTGCTGTCGA GCGTCATCTC GCGCTCGTGC
ATAAATCTGT ACGCCGAAGC CAAGTACATC GACTTGGACG TCATGCTCCA CGAACCCGAA
TTGGCGGCGC ATTTGAACGA AGGCGACTGC CGACCGAGCG TCGTCGTCGC CGGCTTGCTC
ACGCGCGTGG GCTTGGGCGT TCTTCCCACC GAAAGCGTGC TTCGATTGTG GGACGCGCTC
ATTCTTGAAG GCGGCCAGGT ACTGGCACCG TTTAGCATTT TGGTGATGAA GGCTGCGAAG
GAGCAGCTTC TCGCCGCCGC CGTCGGCGAC CTGTGCGAGA CGTTTGACGC CGAGGCGGCG
CGGATGCACG ACGTCGGCGA TACTTTGATG GACGCCATCG TCGCCTCGAG GGAAATGAGT
TCAAAATTTG ACTCATTGAG CATAAGATTG GGCGAACGCG AGGTCACTGC GGATGTGTTG
AACAATCTCT TCAACTTTAG AGACGTCGTA CGTTCGCTCT CAGAGAGCGC CGGCCCGGAG
GGCATCGGGC GACAGGAAAT CATCACTCGC GAAGAGCTTG AGGAGGTCGT GTGCGCGACG
TACTGCCTCG AGCAGTTCAC CGACGTGGAC ACGGCGGTCG ACAAAAAGTA CCAGAGTCGT
GAGTTGCTCA TGGCGTACGA TTTAGCCGTG CGTCACAAAG AAGAGCTCAA GACGAAGGGC
TTGCGCTTCG ACGAGTTCAT GAAAGTGTTA CGCGTCAAGT CGAGCACGTC GAGCAAGCTG
AAGATGCTCG CGGTAAAGGG TGACACCGTG GAAGCGCGGG TGAAGAATTT CATCATCGGT
GAGACGAACG ACGGTATGCC TACCGAAAAG TCGGTCAAGT TGGCGCTCTT TGTCGCCAAC
GGCGTCATTC CCACGCAGCG CCTGAGCAGC GCGCCGGTGG AGAGCAAGAT TTTGAACGGA
CTCGCTTCGA GCGAAAATTG GTACTGCGAG ATGCGCATGA ACGCCCGCGC GGCGTTAATT
CTCGCAAATT TCGCCATTCC GCTCTTCATA ACCGAAGACG CCGTCCCGAG CATGGAACGC
GACGACGCGA GCGACTCGAA AGACGCCTTT GACGTCTCGA TCATCGCGTC CAAAGCGAAA
GCGCTGGACG ATTCTCCGCG CGCGTTCGGC GGTCTCGTGC CGCTCGCGCA CACCGAGTAT
CACATTCTCG TGCAAACGCG AGAAGGCCCG CCTCGAGTGG TGAAGAAACG CTTCAGCGAC
TTCAAATCGC TTCACGAAGA GCTCCGCAAA AGCGGATGCT ACAACGTCAC TCGCGTCGCC
GAAAACGCCA TCGGCACCGA CGCCGCGCTG AGCGTCGACC CACACGTCGT CGCCTCACGT
TCGGTGAGCT TACAGCGATA TCTCGATCAA CTCAACGCGT GCGGCTTACC GAAAGTCCAT
CGCTTTTTGC GCGCGTTTCT CGGTTTGGAC GAGCCCAAAT CCCGAGTCTC GCGTCTGCGT
TCGCTCTGCG CCGCGTGTTC GCCCGCGCGC ATCGTCTGCG GTTTCACCGC TCGCGCGCGA
CGACGATAAT GTACAACACT CTGCATCAAT
 
Protein sequence
MSPVRASTKL ATRARYAAID EDAGEEDAAS FVDADDRMPF GRASDFPPSY GEAKALKRVE 
GEASVSGEPS SEEEDLEAAT PRDELGFEVP ESLRETHEAR RAVRADHRIR QMEYLEVYRN
VPEKQRGVGG DACLALAVNG IHPDHRAEIW AEKLKAHVKQ YSSSHSFYQY LELGQASLSD
AERELIEGDV RAACPTHPLL RSDVAESTSR STSSSFTHAF ANTASEGFVL GGKGVAFQDF
PRTLINILIA AAERSPHGYC SGFVVPAAVM LLLTEDEEAS FWMLAGFTED VLSSVISRSC
INLYAEAKYI DLDVMLHEPE LAAHLNEGDC RPSVVVAGLL TRVGLGVLPT ESVLRLWDAL
ILEGGQVLAP FSILVMKAAK EQLLAAAVGD LCETFDAEAA RMHDVGDTLM DAIVASREMS
SKFDSLSIRL GEREVTADVL NNLFNFRDVV RSLSESAGPE GIGRQEIITR EELEEVVCAT
YCLEQFTDVD TAVDKKYQSR ELLMAYDLAV RHKEELKTKG LRFDEFMKVL RVKSSTSSKL
KMLAVKGDTV EARVKNFIIG ETNDGMPTEK SVKLALFVAN GVIPTQRLSS APVESKILNG
LASSENWYCE MRMNARAALI LANFAIPLFI TEDAVPSMER DDASDSKDAF DVSIIASKAK
ALDDSPRAFG GLVPLAHTEY HILVQTREGP PRVVKKRFSD FKSLHEELRK SGCYNVTRVA
ENAIGTDAAL SVDPHVVASR SVSLQRYLDQ LNACGLPKVH RFLRAFLGLD EPKSRVSRLR
SLCAACSPAR IVCGFTARAR RR