Gene OSTLU_25000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_25000 
Symbol 
ID5003628 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp52573 
End bp54376 
Gene Length1804 bp 
Protein Length536 aa 
Translation table 
GC content59% 
IMG OID640419049 
Productpredicted protein 
Protein accessionXP_001419691 
Protein GI145350602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG AGGCGACGCC GCTCATCGGC GATGATGGCT CTAGGAGCGC GCGACGGACG 
CGCGTTGGGT CGTTATTGTC GCTGATCGCG GCGGTGGCGA TCGTCGTCGC GTCGGCGACG
GCGCGGCGCG ACGCGCTCGG CGCGCAGTCG TGCGCGGAGG GACGCGCGGA CGTCGCGTTC
CTCATCGGAG GATCGGTGCG CGGGATGGTG TTGGATCACG TCTCCAAGGG TTTGAAGACG
AATGTGCTGG ATTGGATGGC GGAGCGCTGC GTGAACGTGC ACCCGATCAT GCTCCTGAGT
ATCGCAGACG TGAGCGGGTG GCGAGACCGA TCGGCGATGT TTCCAAAGGT GTATCCGCAC
GTGCTGCAAC GCGCGCTGGA CGTCATTCGA CCCGTGGCGG TTTCGTTTTA CACGGCCTCG
GCTTATGACT TAGACACGAA GGATCCTTGG GGACAGCATT GCGCTGCGCG TGGATTCAAG
GTGAAAAAAG ACGACTACTT TTCGCCGGCG ACGACGTACG CGCAGTTCGA TTTGAGCAAA
AGGCTGCTTT GCATGGCGCG CAAAGTGGAG CAGGAGAAAA ACATACACTT TTCGTGGTTC
GTTCGGAGTC GACCCGATTA CTTTTGGTAC GGGCCGCCGC CCGTGGACTT TGCCACGACG
TTGTGGGACG GTAGGGGTAC AGACAGCGCG CACGCGTTCA TCTTTGACGA GGATTGGCGT
CACAAGTACA ACGACGCCTT ATACGCCGTG CACAGTTCGC ACGCCGATGG TATACTGGGC
CCAGGGTCAT CGATTTTGTC GAAATTACCA TGCCGAGCTG AGATCCCCGC GACCGGTCAC
GTCTTCCTTG AACGTATGAC TCCGGAGACA GCCCTTCACA AAGTGGTAGA CCTCGTCGGG
GCGGCGTCGA GGGCCGTGGG AATCGGGTTC GAGCGATCGG CTCGGCCAAC CGCAAAGCCA
GGACAAGGTA CGCTGAGTTG CGTAGATTAC ACACTTCAGA GGCACATACA TCCGTGCGAG
CGTGCCCAGG CAATTAGTGT GTCAGAGACT AAAGTTTACC GAGCGCAAGT AAGCCACTGG
CGCTCTTTGA ACGCGTACGC CGACGACCCG CCGATGCAAT CGATGGGACC GACGTGCTAG
TTAGAAGCAC TTTGACAAAG CTCAGAAGTT GCTTTGCATG GCGCGTAAAG TGGAGAAGGA
GAAAAACATA CACTTTTCGT GGTACATGCA CGGTCGACCC GAGTACTTTT GGTACGCGCC
ACCGCCCGTG GACTTTGCCA GGACGTTGTG GGACGGTCGG GACACGAACC ACGACACGGA
CGCTGTCCAA CCTACGCTTA TCTTTGACGA GGACTGGTAT TGGAAGTACA ACGACGCCTT
TTACGTCGTG CACAGTTCGC GCGCCAATGC TTTTTGGGGT CAAGGAACGG ATGTATTGAA
AAGCGTCGCG TGCGTAAGTC CCCGTTCACA AATGAGTCCT GAGGCATCTA TTTTTCACGT
GGCGGACTAC GCCCACTGCA ACGTCCGTCG CGGCATATCG TTAGGGCACT CGGCGTGGCC
GGATCGCGAC GGGATGGGTG TGCATTGGTG TCACGGAATC TCTGAGGGCA ACACGACGAT
GATCAATGCC TGTAACGCGG CAAACAAGAT TAGTACAGAG GCGAACGCTA AATACCGCGA
GCGAGCCAAA GACTGGCTCG AGAAGCGCGC GGCCGCGGCC GCGGCTGAGG CTGAGGCCGC
GGGCTCGGCG GCGGCCAAGC CGGCGCCTCC CGAGCGGCCC GCGGCGCGTG GACCCACGTG
CTAG
 
Protein sequence
MTDEATPLIG DDGSRSARRT RVGSLLSLIA AVAIVVASAT ARRDALGAQS CAEGRADVAF 
LIGGSVRGMV LDHVSKGLKT NVLDWMAERC VNVHPIMLLS IADVSGWRDR SAMFPKVYPH
VLQRALDVIR PVAVSFYTAS AYDLDTKDPW GQHCAARGFK VKKDDYFSPA TTYAQFDLSK
RLLCMARKVE QEKNIHFSWF VRSRPDYFWY GPPPVDFATT LWDGRGTDSA HAFIFDEDWR
HKYNDALYAV HSSHADGILG PGSSILSKLP CRAEIPATGH VFLERMTPET ALHKVVDLVG
AASRAVGIGF ERSARPTAKP GQAQKLLCMA RKVEKEKNIH FSWYMHGRPE YFWYAPPPVD
FARTLWDGRD TNHDTDAVQP TLIFDEDWYW KYNDAFYVVH SSRANAFWGQ GTDVLKSVAC
VSPRSQMSPE ASIFHVADYA HCNVRRGISL GHSAWPDRDG MGVHWCHGIS EGNTTMINAC
NAANKISTEA NAKYRERAKD WLEKRAAAAA AEAEAAGSAA AKPAPPERPA ARGPTC