Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_16877 |
Symbol | |
ID | 5003837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009363 |
Strand | + |
Start bp | 538695 |
End bp | 541733 |
Gene Length | 3039 bp |
Protein Length | 1012 aa |
Translation table | |
GC content | 56% |
IMG OID | 640419258 |
Product | VIC family transporter: sodium/calcium ion channel |
Protein accession | XP_001419628 |
Protein GI | 145350470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0101498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCG ACGACGACGC GGGACGGCGT GCGCGGGGGG AGGCGAACGC GGGCGAACAC CCTGGACGGG AGCGACGGAC GGCGACGGAC GACGAGGACG ACGGCGACGC GGGGGCGGGG GGGGGGGCGA GGGACGAGGG CGCGCGGCGC GAGGGCGGGC GCGAGGGCGG GAGGGCGCGG GAGGCGCGGG AGGGGGCGGG CGACGCGCGG ACGACGCGCG AACGCGAACG CGAGCGCGAG CGCGAGCGCG AACGCGAGCG CGAGCGCGAG CGCGAGAGCG AGAGCGAGAG CGAGAGCGAT TCGGCGTCGA CGTCGACGTC GGACGGATCG ACGACGACGG ATGGGGAGAC GCGCGCGGGC GCGGCGCCGG CGACGGAGGA GTACGACGTC GAGGGCCGAC TTCCGTCTCG AACGCCTCCC GCGGGCGATT CGCGAGGATT CTGGACGCGC TGCTATCACG AGGGCGCGAA GTTTTGCGGA CTCGGGGTTT TGTTGGAGGA AATTCCGTCG GAGAGTTCTT CGAGCGAGAG TTCGAGCGAT TCCGACAGCG AATCGGACAG CGAAGGATCT CGACGACGTC ACAGGTTGCG CGCGTTGGAT AGCTTTAAGA GCAACATGTC GGAGGGTTCA GAACTTGATG AAGCAGATCT CAACGACGAG GTTAAGCAGA GAGTTCTAGA CGAAGGGAAG GCGAACATTT ACCCGTCTCT GGCGATCATG GAGGTGCTGT TCAACAAAAT GCAGGAACGA CTCTCGAAGA AAGCGGTTCG CGACGAAATG CTCGAGGCGA AACGCGCGGA CGAAGCTGTT ACGGCCGCAC ACCGGAATCG CAGGCAACGG TCGAGAGCGT GGCTGTTGCA TCAGTTTGTC TCGTCCAAGT TCTTTACGTT TCTCACCGCG TCGATGATTT TCTATTCCAG CATCGTGTGC GGCATCGTGT CGCAGGATCC CGACAAATGG TTTGACACGA AGTTCGAAGA TGTTAGCTTC TTAGTGCTGA ACATCGGGTT CGCCGTCGAA GCGGTCATGC GCATCATGTC TAGCGGCGTC ATCATCAAAG AGGATGGCGT CAAACACTTG GTCGAGTTGA GGCCTCATTA CTACTTTCAC GACCCCGTTA ACTGCGTCGA TTTCGTCGTG ACAGTGCTGT CGTTTATGGA GTACGTCGTC AGCGGTAATT CTCTGGACGC CGTGCGAACT TTCCGTCTCA TTCGATTGCT TCGTCTGATT CAGATGGTCG AAGACATGCG TGTAATTTTG GATGGCGTCA TCCAAGGCGT CCTGAGCATA GTCTGGATTC TCGTTCTCCT TACGGTCGTC GTGTACATCT ACGCTGTGAT CGGTGCGGTG TTGTTCGGTG AAAACGATCC GCGCAACTTC AGAAGTCTGA GCATCGCGTT CAAGACGGTT ATATCGATGA CGACGATGTC GGACTGGCTA GACTTTCTGT ACATCAATTA TCATGGCTGC GACCAGTACG GCTACGACGG AGCAGACGCG TCTTATTGTA CGAACCCAAA GTCGCAGAAG GTATTGGCGA CTGCGTACAT TATGTCTCTC ATCGTCATTC TCGGTAATAT CATGATGAGC CTGTTCATCG GGGTCATCAC AAACAAGATG GAGGACGCCG CGCTCGAACT GAAGGATTCC AAAGACGCGA AAAAGAGGAA GACGAAAGCC GCAGTCGCAG CTGAGGTGTG GGACGATCCG GCGTTAACTC CGTTAAAAAT CGGTGCCGAG CAGTACGCGC AGTTGCTGTA TCACCTGAAT TTACTCTCCG GCGTGCGAGC GGAAGGGGTT GTCAGGCCGC TGCCAGATCT GCCAAAGTGG AAACGCGCGC AACTCTGGTT GAAAAGAATG GTCACGAACA CAGTGTTCGA GTGGGGTGTC GTGATGATGA TCATCGCCGT GGCTATTACT TCGGGTCTTG GTCTTGAATA CAACCAGCAA GGCAAAGAAT GGTACAAGAC AACTGAGGCG TTTTTCATAG CCGCCTTTAC GGCTGAACTC ATCATAAAGT TTTTCGCCTA CCTCGACAGA AGTCTTTCGT TTTACACGGG CAAGCAAAAG TGGTGGAACT TGTTTGACAC ATTCGTGGTG CTGGTTGGGC TCATACCCAG TTCGTATCAG AAGGCGGCGG TCGTTGTGCG ACTTCTTCGG CTCCTTAGAA TCCTGCGCCT CGTACGCGTG ATCAAGCAGC TGCAAGTCGT CGTTCTCTCG CTCATCGCGG GAATGAACTC GATTGTTTAC GTCGCGGTGT TTATGAGCGT CATCTTCTTT GTCTACGCCG TGGCAGGCGT ACAAGTGTTT CGATTGAACG ATCCATTCCA TTTTTGCGAT TTGTCCAACG CCGTGGTGAC GCTTTTCACG GTATCCTTCT TGGAAGACTG GCGACCGGTG TTTGACATCA ATTTTTACGG CTGCGACAAA AATTTGTTCG GCGATACCGA TGGCGGCGTA TATTACGCGT CGACGATTGA TGTTGACATA TCGAACGGCT CGACCGTGGT GTGCTCGCAT CCACAGCAGC ACAAGATGTT TGCGTTCTTC TTCTTCAGCT CGTACATTCT GTTGTCAGCC ATGGTCCTCG TGTCCGCGTT CGTCGGTATC ATCGTGACGA GTATGCAAAG CGCGTCCACG ATGGTCCGCC AGCGCCTTGC CTCCGAAGAG CGCCTGAAAA TGATCGAAGA ATTCTTCCAA CTCGACGAAC ACGCATCAAA ACAAACTGTT TACGTATACA ATCTTCTTGA CAGCGGATTT GAAGGCGAGC TCACGCCGGA GAAGATTATG GAGAAGATGG CGCTCTTTGA CATTCCCACG AACCCGGAAC TCCTCAAACG CGCGCATCAA ACCGTGAACG GGCTCATGGA CGCCCCGTTC GACGCGGCCG ACTTCTTGCT TCTCACGGTT CTCGCCGAAC GCGCGAGAAA AGTACAGGAA AAGCTCGATG AAGACGGCCA AGTCGGCTCG CTCGAAGACG TCGATTTTAT TCGCGCGCGC CTGAACCAAT CGGGTCACCA CGATATCGGT GCGCCCTAA
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Protein sequence | MSSDDDAGRR ARGEANAGEH PGRERRTATD DEDDGDAGAG GGARDEGARR EGGREGGRAR EAREGAGDAR TTRERERERE RERERERERE RESESESESD SASTSTSDGS TTTDGETRAG AAPATEEYDV EGRLPSRTPP AGDSRGFWTR CYHEGAKFCG LGVLLEEIPS ESSSSESSSD SDSESDSEGS RRRHRLRALD SFKSNMSEGS ELDEADLNDE VKQRVLDEGK ANIYPSLAIM EVLFNKMQER LSKKAVRDEM LEAKRADEAV TAAHRNRRQR SRAWLLHQFV SSKFFTFLTA SMIFYSSIVC GIVSQDPDKW FDTKFEDVSF LVLNIGFAVE AVMRIMSSGV IIKEDGVKHL VELRPHYYFH DPVNCVDFVV TVLSFMEYVV SGNSLDAVRT FRLIRLLRLI QMVEDMRVIL DGVIQGVLSI VWILVLLTVV VYIYAVIGAV LFGENDPRNF RSLSIAFKTV ISMTTMSDWL DFLYINYHGC DQYGYDGADA SYCTNPKSQK VLATAYIMSL IVILGNIMMS LFIGVITNKM EDAALELKDS KDAKKRKTKA AVAAEVWDDP ALTPLKIGAE QYAQLLYHLN LLSGVRAEGV VRPLPDLPKW KRAQLWLKRM VTNTVFEWGV VMMIIAVAIT SGLGLEYNQQ GKEWYKTTEA FFIAAFTAEL IIKFFAYLDR SLSFYTGKQK WWNLFDTFVV LVGLIPSSYQ KAAVVVRLLR LLRILRLVRV IKQLQVVVLS LIAGMNSIVY VAVFMSVIFF VYAVAGVQVF RLNDPFHFCD LSNAVVTLFT VSFLEDWRPV FDINFYGCDK NLFGDTDGGV YYASTIDVDI SNGSTVVCSH PQQHKMFAFF FFSSYILLSA MVLVSAFVGI IVTSMQSAST MVRQRLASEE RLKMIEEFFQ LDEHASKQTV YVYNLLDSGF EGELTPEKIM EKMALFDIPT NPELLKRAHQ TVNGLMDAPF DAADFLLLTV LAERARKVQE KLDEDGQVGS LEDVDFIRAR LNQSGHHDIG AP
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