| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_16860 |
|---|
| Symbol | CHR3513 |
|---|
| ID | 5003885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009363 |
|---|
| Strand | - |
|---|
| Start bp | 502904 |
|---|
| End bp | 505369 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640419306 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419826 |
|---|
| Protein GI | 145350886 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.210208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0295097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC GAGGCGCGAA CGACGATGCC CACGGGTCGG TGCCTCGAAT GGCGAACGCG
AATCGCGCGT TCGTGTCGCC GTACGTGGGC GCGAACGGCG CGAACGGCGC GACGCGCGCG
CCTCCGTACG CGCGGCGCTC GGTGAAAGTC GCCGGGCGCG GGCGGGCGAC CGCCCGGGAC
GATGCGGCGC GGCGATGCTT CTCGGCGCTG TACGCGAAGC GCAAGGCGGG CGGCGGCGGG
AAGCAAAGGT CGGCGAAGAC GTTCGTGGAC GGCGTGGTGA TCGCGCGAGG CGCGCGCGAG
CGGGCGGAGC TGTGCGATAT GCGAGGGAAA CGGGTGGCGA GAGGGTGCGC GGGGACGATC
GTGGAGGGGA CGACGTGCGA AATCGGACAG TACGAGGTGG AAATCGGCGA GGCGGTGCGC
GCGGAGGACG TGGACTCGGG CGCGGCGTTC TCGCGCGGCG GCGCGGCGGT GGCGCCGGAG
AAGGTGGTCG TCGCGAACGA GCAGAAAGTG AAATCGTTCG TGGCGCCGGT GCGCGGGATC
GGCGGCGCCG TCGGATCGGC GACGACGTCG GAGGCGAAGA AGACGTTCGC GCCGGAGGCG
CCGTTGCACA GCGACGTCGC GGACGGGGCG CTCGTGTTGT CGACGCTCGA CACTGATTTC
CATCGCAGAG ATTATCGCAC GGCGTGTGCG GTGGTGTGCG ATCCGTTCAT ATCGAGGTTT
CTCCGCCCGC ATCAACGCGA CGGCGTGCAG TTCATGTACG AAGCCGTCAT GGGACTGCGA
ACGAGCGTGC ACACGAACAG GGCGCACACC GGGTGCTTGT TGGCGCACGA AATGGGTCTT
GGTAAAACGT TGCAAGTCAT CGCGCTCGTG TGGACTTTAC TCAAGCAGTC ACCGTTCAAG
CGCGGCCAAC CGACGTGTCG ACGCGTCGTC GTGTGCGTGC CGGCGTCGCT CACGGGGAAC
TGGGCCTTGG AGTTTCGCAA GTGGCTCGGC GAGGAACGCT GCGATCCAAA AGTCGTGGAA
GGCGGTGATA AGGAGGCGAG AAAGAGTTTC GAGGAATTCG CGCTTCCATC GCAGCGCAGA
TACAACGTGT TGATTACATC GTACGAAACC TTGAGAGCGC AGGCGGACGT CGTCGCGAGG
GCGAACGTCG ACTTGCTCGT GTGCGACGAG GCGCATCGCC TGAAGAACGC GACGCAGTCC
ACGAAAGGCG CGCAAGCGCT CGCGTCGCTC AAGTGTCATC GCAGGGTGCT TCTGACGGGC
ACGCCGATTC AGAATAACTT GGACGAGTTG TGGGGTGTGA TGGACTTCGC GGCGCCCGGC
TTGCTGGGAG ACCTCGATTC GTTTCGCAAA ATTTATTCCG GGCCGATCGA GAAAGCGAGC
GAGCGTGGGG CCAAGGAAGA AGTTGTGCGA ATCGGTAACG CACGTCGCGA AGAGGTCGGT
CGTTTGATCG GCCCTTTCAT TCACTCGAGA AAAGCGGATG AGATCAACGC GTCGCTGCTG
CCGCCAAAGA CCGAGTACGT CGTCTTCGTT CGACTTTCTG AAGTGCAGAA AGGCTTGTAC
GTCGACCAAC TCAAGCAAAA GTCGATGCTT TCGATGCTCG GGCGAATCGG CAAGACGCAA
GATGCGGAAT CCATCTCGCC GCTTCAGGCG ATTCAGACGC TGCAAAAGCT CTGCAACGCG
GCGGCGCTCG CGACTGAGGT GAGCGATCCG GTGGCTTCGT CGAGCAAACT CGCCGTGTTG
CGCGCCATGT TCCGGGCGCT CGCCAACGAT GAACGCATCG TCGTCGTCTC TGGCTTCACC
ACGACGTTAG ACCTCATCGC CAAGCTTTGC GAGAGCGAGC ACCTGAAGTA TGATAGATTA
CAAGGTTCCA CGCCGCCGAA AGAGCGCACG TCCATTGTTC GCACGTTCAA TAATTCTGGC
AAGATTTTGT TGCTCTCCAC GAAAGCTGGA GGTGTCGGGC TTAATCTGGT CGGAGCGAAC
AGATTGGTAC TAGTCGACTC GTCGTGGAAT CCCGCACACG ATTTGCAAGC CCAGGCGCGC
GTGTGGCGAG AAGGTCAAAC GAAACCGTGT TCCATCTATC GCTTGCTGAG CACGGGAACG
ATCGAGGAGC GCATGTTTCA GCGCCAAGAG CTCAAAGGCG CGCTCGCGCG AACGCTCGGA
TTCAAATCAA CTTCTGGTAA CAACAACTCC GCCGGATCGA GCTCCAGCAC GTTCACGCAA
GCCGAACTGC GAGACCTGTT TTCGTACGTC AAGGACACGC GGTGTGACAC CGCCGACCGG
ATCGCCGCCA TGACGGGCGA GACGCCCGAC CACTGGCGCG TGGATGCATC GACGACCACG
ACCGATCCCT TACTCATCAA CGCCATGAGG AGCGATCTCA TATCGTTCGT GAGTGAGCTT
CCGTCGAACG GAACGACGAT AGATGCGCAA ATTCACGACG CCAACGACGA CGCCGACGAC
GAATAA
|
|---|
| Protein sequence | MTTRGANDDA HGSVPRMANA NRAFVSPYVG ANGANGATRA PPYARRSVKV AGRGRATARD
DAARRCFSAL YAKRKAGGGG KQRSAKTFVD GVVIARGARE RAELCDMRGK RVARGCAGTI
VEGTTCEIGQ YEVEIGEAVR AEDVDSGAAF SRGGAAVAPE KVVVANEQKV KSFVAPVRGI
GGAVGSATTS EAKKTFAPEA PLHSDVADGA LVLSTLDTDF HRRDYRTACA VVCDPFISRF
LRPHQRDGVQ FMYEAVMGLR TSVHTNRAHT GCLLAHEMGL GKTLQVIALV WTLLKQSPFK
RGQPTCRRVV VCVPASLTGN WALEFRKWLG EERCDPKVVE GGDKEARKSF EEFALPSQRR
YNVLITSYET LRAQADVVAR ANVDLLVCDE AHRLKNATQS TKGAQALASL KCHRRVLLTG
TPIQNNLDEL WGVMDFAAPG LLGDLDSFRK IYSGPIEKAS ERGAKEEVVR IGNARREEVG
RLIGPFIHSR KADEINASLL PPKTEYVVFV RLSEVQKGLY VDQLKQKSML SMLGRIGKTQ
DAESISPLQA IQTLQKLCNA AALATEVSDP VASSSKLAVL RAMFRALAND ERIVVVSGFT
TTLDLIAKLC ESEHLKYDRL QGSTPPKERT SIVRTFNNSG KILLLSTKAG GVGLNLVGAN
RLVLVDSSWN PAHDLQAQAR VWREGQTKPC SIYRLLSTGT IEERMFQRQE LKGALARTLG
FKSTSGNNNS AGSSSSTFTQ AELRDLFSYV KDTRCDTADR IAAMTGETPD HWRVDASTTT
TDPLLINAMR SDLISFVSEL PSNGTTIDAQ IHDANDDADD E
|
|---|
| |