| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_1452 |
|---|
| Symbol | |
|---|
| ID | 5003813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009363 |
|---|
| Strand | + |
|---|
| Start bp | 448382 |
|---|
| End bp | 449860 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640419234 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419599 |
|---|
| Protein GI | 145350409 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat
[COG5273] Uncharacterized protein containing DHHC-type Zn finger |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0338335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.137357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GATATTTGGC GCGCGGCGGC GTATGGGAAC GTCGACGCGA TGAAACGGAT GATCGATGCG
GACGAAGGGT GCGTGAACGC GCCGGATGGG TCGGGATTCC GCGCGCTGCA GTGGGCGGCG
CTGAATAATA GAGTCGCGGC GGCGACGTTG TTGCTCGAAC GCGGGAGTTC GATAAACGCG
GGGGATAACG ATGGACAGAC GGCGCTGCAT TGGGCGTGCG TGCGAGGGTC GCTGCCGTGC
GCGGAGTTGC TGCTGCGGAA AGGAGCGGAG TTGAACGCGG CGGATTCGCG GGGATACGTG
CCGCTGCACG TCGCGGCGCA GTACGGTCAC ACCGGGATGA TTTATCACTT TAAAATGCGA
TGGAACATCG ATGTTGACGT CACCGATCAC GACGGTCGAA CGGCGCTGCA CTGGGCGGCG
TACAAAGGGT TTCCCGATCC CGTCAAGTTG TTGGTGTGCA TGGACGCGGA CGTGTACCGG
GCGGATAAGG AAGGCTGCAC CGCGCTGCAC TGGGCCGCCA TCAAGGGCAA GAGCGAAGCC
GCGCATTTAA TAGTCCGCGC CGGCGGTTTG AACGCCATGA CGGCGGTCGA CGTCGACGGA
AACACGGCGG AGGCGCTCGC GCTCGAGAAA GGCCATCACC TCCTGGCGAA TTTCCTCGCC
AAGGAGCAGC GCGCGCTTTT GAGGCGCGAT AATTTTTGGA CGCAAAAAGG CTTGGCTGTC
GCGTGCCTCG GCCTCATCGT CGGATTGATG CTGATGTTCT CGCATTACGT CATCTTCGCC
GAAGGCGTCG CCACGATGGA CGTGACGTTG TCGTTTTGGT CGCTCGTCAG CCTCGCCTCG
GCGAGCTGCG GATTGTACTA CATGAAGCGC GTCTCGCAAG CCGACCCGGG GGTCGTCACC
GCCTCTATTT TATCCTCCAT TCGCCGAGGC GCGCGACCGA GCTCGGCGGC GCATGACGTG
GACGAGCGAT TAAATCACGC CGAGCTTTGG GCCGGAAACT GGAACCAGCT CTGCGTGACG
TGCAAATTCG TCAAGCCGTT CGGCACGAAG CACTGCGCGG TGCGCGACAA GTGCGTGGCG
CGTTTCGATC ACTACTGTCC GTGGATGGGG AACACGATCG GGAAGAGAAA TCACAGAGAC
TTCGTCATCT TTCTCATTCT CGAGTCTCTC GCCATGGCGA TCGCCTTTTG CGTCGCCATC
GCGCGTTTCA ACGAAGAGTC TCCGACGGAG CGCTTTCGCT CCACCGGGGG CATCGCCTGC
TTCGCCGTCT TCGACGCCCT CACTCTCCTC CCCGTCGCCT TGCTCACCGT CGCCCAGCTC
AGTCAAGCCG CCCGGAACAT CACCACCAAC GAGCTCTCCA ACGTCCATCG CTACGCCTAC
CTCAAATCCG CCGAGGGCAG GTTCGCCAAT CCGTTCGACC GCGGCTCGTT CGCGCGCAAC
CTTCGCGCGT TTTTCCTCGT CGGCAAGAAG GAGCCTCTG
|
|---|
| Protein sequence | DIWRAAAYGN VDAMKRMIDA DEGCVNAPDG SGFRALQWAA LNNRVAAATL LLERGSSINA
GDNDGQTALH WACVRGSLPC AELLLRKGAE LNAADSRGYV PLHVAAQYGH TGMIYHFKMR
WNIDVDVTDH DGRTALHWAA YKGFPDPVKL LVCMDADVYR ADKEGCTALH WAAIKGKSEA
AHLIVRAGGL NAMTAVDVDG NTAEALALEK GHHLLANFLA KEQRALLRRD NFWTQKGLAV
ACLGLIVGLM LMFSHYVIFA EGVATMDVTL SFWSLVSLAS ASCGLYYMKR VSQADPGVVT
ASILSSIRRG ARPSSAAHDV DERLNHAELW AGNWNQLCVT CKFVKPFGTK HCAVRDKCVA
RFDHYCPWMG NTIGKRNHRD FVIFLILESL AMAIAFCVAI ARFNEESPTE RFRSTGGIAC
FAVFDALTLL PVALLTVAQL SQAARNITTN ELSNVHRYAY LKSAEGRFAN PFDRGSFARN
LRAFFLVGKK EPL
|
|---|
| |