| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_88041 |
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| Symbol | TPR1 |
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| ID | 5003455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009362 |
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| Strand | - |
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| Start bp | 450778 |
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| End bp | 452667 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | |
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| GC content | 62% |
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| IMG OID | 640418876 |
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| Product | TPR-repeat containing protein |
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| Protein accession | XP_001419384 |
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| Protein GI | 145349939 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.220076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0637913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA GAGAGATACA CGCGCTGACG CGCGCGGGAC GACGCGACGC GGCGGCGCGG
GAAGGGACGG CGAGCGCGAG GGCGAAGCCG GCGGACGCGG CGGTCGCGAG CGCGGCGACG
ACGGCGTGCT TTAAAGCCGG TGACGTCGAT GAGGGACGGG CGATCATGCG AAGACATCGC
GAGAGCGTGG GTGACGGTAA GGTTGGGTGC GTCGTGCTGT GCGCGTGGGC GACGGCGGAA
TCGGGAACGG GGACGCGGGA CGGGGACGCG AACGCGAGGG CGTTGCTGCG AGAGGCGACG
ACGACGGCGA ACGGAGACGC GAGGGCGGTT TGCGACGCGT GGGTGGCGCT CGGGAATCAC
GAACTGAAGC ATGGTCGCGT TGATAAGGCG AGAAAGTGCT ATAAGAGCGC GTTGAGCGCG
GGAGAGGGAG CGCCGGCGAG CGCCGCCGTG GCGGCGCACT CGTGGGCTCG GTTGGAGGCA
AAGGAAAGGA ATCCCAAGCT CGCGCGAGAG CTCTTCGCCA AGTCGGTGGA CTTGTGCGAA
ACGCACGTTG CGAATTATAC CGCGTGGGCG TCGTTTGAAA TGAGTCGCGG GCAGAGCGAT
GCGGCGAGGA AATTGCTCGA GCGCGGGGCG GCGTTTTGCA AGTCGGCGGA AGAGTTGCGC
CAGACGAACG ACTCGAAGAC AAGGCGAGCT CGCTCGATGG CTTCGGCGTT GTTCACGTCC
TGGGGGGACA TAGAGGGGCA AATCGCGTTG CGTGAGAGCG AAGACTCCGC CGATGCGCTC
GATATCGCCG TATCCAAGTC GAGAGGAATG TTTGAGCGCG CGTGCGCGTA CGACAAGAAG
AACGTCGCGG CGTGGTTGAA GTGGAGCGAA CTCGAGAAGG ATATCGCGCG CGGTAATTCG
CATCGCGGTG GGGTGGTGAT GAGCGCAAGA CGGAACAGCG TGTCGAACCG TCGGCAACTC
GATGTCTTGA CTGCGGGTTT AAAGGCGAAT CCGGGCGAAA TGCGACTCGA GCACGCCTAC
GCCATGGCGC TGAAACTCAA CGGCGACGTC GAGGAGGCAA CGAGACGACT CCATCGTTTA
AGCGAGCGGT TTCAAAACAA CGCGCACGTG TGGCACGCAC TCGGAACTAC ACTTCAGGAA
TCTGGTGATT TTCAAGGCGC CATAGCGGCT TTTGAACGTG GATCTTTTGC TTCAGGTCGC
GCCAACTTGC CGTGCATCAC CGCGGCCGCG GCGGCGGAAT TGCACGGCGG CAAGCACGGT
CGTGCTCGCC AGCTGTTTGT CCAAGGCGAT TCCGTTCCGC GGCATCTGAG TACTCGTCGT
GAGCGCGCCG CACACCTCCG ACTGTGGGCT TTGCTAGAAA AGCGTGCCGG GGGCGAGGAG
GCGACGCGTA AACTGTTCAT CGCCGCCACC GCTGAAGATC GCACCGACGC CGCGACTTGG
TTGCAGTGGG GGCAATGGGA GAAGCGTGTG AACAGTGTCG GCGCCGCGCG CAAGGTATTC
AAAGATGGAA TTCGCTACGG CGTGAATAAT GGACAATATT TCATCTATCA GGCTCTAGCC
ACTTTGGAGG CGGAGACAAA CAATCACGAA TCGGCGCGAG AGTTATTCAA GCAAGGATGT
TCCGCGCATC CACGCAGCGC CTCTCTGTGG CTGCAGTGGG CTCTGTTCGA GCTTTCGTGC
GGCGAAGACG ACAAAGCTGC GTCGCGGAAT TCGATTGCAG TCATCGAAAA AGGGGCATCG
CGCGCGCCGC CGCACATCCC GCTCCTCGAA CTGTGGCTCA ATCTCGAACG AAAGGCTGGC
GACGAGCACA AGGCGCGCGC GGTGGAGGAC AGGTTGAAAA AGCTTCTCTC CGAGCAGCGA
TACGCTCCGG TCGGTCACGA AGTGAATTAG
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| Protein sequence | MRAREIHALT RAGRRDAAAR EGTASARAKP ADAAVASAAT TACFKAGDVD EGRAIMRRHR
ESVGDGKVGC VVLCAWATAE SGTGTRDGDA NARALLREAT TTANGDARAV CDAWVALGNH
ELKHGRVDKA RKCYKSALSA GEGAPASAAV AAHSWARLEA KERNPKLARE LFAKSVDLCE
THVANYTAWA SFEMSRGQSD AARKLLERGA AFCKSAEELR QTNDSKTRRA RSMASALFTS
WGDIEGQIAL RESEDSADAL DIAVSKSRGM FERACAYDKK NVAAWLKWSE LEKDIARGNS
HRGGVVMSAR RNSVSNRRQL DVLTAGLKAN PGEMRLEHAY AMALKLNGDV EEATRRLHRL
SERFQNNAHV WHALGTTLQE SGDFQGAIAA FERGSFASGR ANLPCITAAA AAELHGGKHG
RARQLFVQGD SVPRHLSTRR ERAAHLRLWA LLEKRAGGEE ATRKLFIAAT AEDRTDAATW
LQWGQWEKRV NSVGAARKVF KDGIRYGVNN GQYFIYQALA TLEAETNNHE SARELFKQGC
SAHPRSASLW LQWALFELSC GEDDKAASRN SIAVIEKGAS RAPPHIPLLE LWLNLERKAG
DEHKARAVED RLKKLLSEQR YAPVGHEVN
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