| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_88029 |
|---|
| Symbol | |
|---|
| ID | 5003444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009362 |
|---|
| Strand | - |
|---|
| Start bp | 424343 |
|---|
| End bp | 426568 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640418865 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419378 |
|---|
| Protein GI | 145349927 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0692998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGCG ACGCCCCGGC GACGCCTTCG TTAACGCGCG ACGGCGCGTC GTCGTGCTTT
CACGTCACGT ACGACGTCGA CGCGACGTCG AACGCGGAGG CGCGACAGAT CGTCGACGCG
CTGTGTCTCG AGCAAACCGT CGAGTTACCC GAAGCGCTCG TCCCGCCGGG GACGTGGATC
AACGAGCACG TCGTGGGAAA ATGCGTGTCG ATCGAGCGGT GCGCTTCGGG GGTGGACGCG
CGCGGGAAAG GCGCGAGTGG GGACGTGTAC AGGGCCAAGG TGCGGTACGC CGACGACTGC
GCGGGCGGCG AGTTGCCGCA GCTGGTGAAC GTCATCTTCG GGAACACGAG CATAAAGGAA
CGGGTGATGG TGCGAGACGT GGAACTTTCG GATGCGATGC TAGGGAAGTT CGCGGGAGCG
AGGTTCGGGG CGAAGGGGCT GAGGAAATTG CTCGGGGTCG AACGCGGACC CATTGTGATG
ACGGCGCTCA AGCCGATGGG GACGCCGAGC GAGAAACTTG CGGAAATGGC GTACGCGTTC
GCGAAGGGGG GAATTGACAT CATAAAGGAT GATCATGGAT TGGCGAATCA ACGGTACGCC
CCGTATGAGG AGCGCGTGCG GGCGTGTGCG GCGGCGGTGA AACGGGCGAA CGCGGAGACG
GGACGGCGGT GCATCTACGC GCCGTGCATC AACGCTCCGG CGCACTTGGT CGTACAGCGC
GCCAAGTTCG CCAAGGCCGC GGGTGCTGGG GCGGTGTTGA TGATTCCAGG AATCACGGGT
TTGGATAGCA TGCGAGCGCT GGCAGAAGAT CCCGATTTTG GGCTTCCCAT CATCGCGCAC
CCCGCTATTC TCGGCGCCAT GCTCGGCGGC GGAAGCCAAA ACACCATTCG CGGATTTGCT
CATGGCGTCC TGCTCGGGTT GCTACCGCGA TTGGCTGGTG CAGATGCGAC TATTTTCCCA
AACTTTGGCG GGCGGTTTGG CTTCAGTGTT GAAGAGTGCA AAGACATTGT TCACGGTGCC
AGGCGAGTCT TGGCGCACCA CCCGTCAATC TTACCGAGTC CGGGCGGCGG CATGACGCTC
GACAAGGTTA AAGTGATGAT GGAGACGTAC GGTCAAGATG TTTTACTCCT CGTCGGTGGA
TCACTATACA GCCATAGCTC GGACTTGACG GCGAATGCGA GGCACATCCT GACTATGGCG
GGTCGCACCG ACATCTACGG GCCTCGAGAA TCACAACCTG GCAGCTATCA CGTGCCAACG
CACTACAGCA ACGGACTTTT CACCCCGGGA AGCGGCATGC GACCCAGATT GAAACTCGTA
GACGAGAGTT CGAGTGCACA TAGCCCATAC CCTCTGACTC CGCACGGCAC GTATCCGGCT
GCGCCGCCGT CGACGCCGTG GACGGTGGGC CTTGACCCTG AAGCCGTTGC TCAAATGAGC
GCGCTTAAAG AGAAGAATTA TGCGCTCGAG TCTAAGGTTG ACGAGCTGAC GACGCTCGTG
AAGAGCCTGA TGGACGCCGA GGCGAAGAGA AATGGAACTA AACACGCGTC TGAGGGGCCG
CTAGACGGAA ATCATAGCAA GGTACTCAAT AGAAAGAAGG GAGAGTTTCA GTGGGAGCGC
GTACCGCAGG AAATGTACAA GATGGATGGG GCGAGTTTCA AGGAGTGTTC ACGCATCGAA
CTCATCGGAA AGCGAGGAGA GAGTCCAGTT TTCCACGTGC GTTACTTTGA AGTTGCCCCG
GGTGGATGGA CGACGCTCGA GCACCACCAA CACGAACACG TCGTCGTAGT GCTTCGAGGG
GAAGGCGAAA TCCAGCTCGG TCTGGAGTCT TACCATCTTG GGGTGGGTGA CGTCGGGTAT
ACCGCACCGG GTGATACGCA CCAGCTTCGG TGCAAGGCAG GCACGACGGA GCCTTTTGGT
TTCATATGCG TGGTTGCGGC GGACCGCGAT CGACCGATTG AAGATGAACC GTACGAGCTC
CTGAAGATGT GCAAAATGGC TCATGTTTTG GATGAAAACG TCCGTGTGGC ACTCGAGACG
CAGATCAAGC ACCGTGCCGA GCATAAGGCG GCGCATGGAG CCGTCGCACA GGGATCCGCG
TGCGAGTGGA AGCCCGGTGG AAAGAAGAAG GCGCACGCGG CAGAGCCGAG CGCATGCGAG
TGGACGCCGA AGAGCAAACA AGCGCCGGCC AAACCCAAAC CCACGCCGAC GCGATACTTC
CCATAG
|
|---|
| Protein sequence | MPRDAPATPS LTRDGASSCF HVTYDVDATS NAEARQIVDA LCLEQTVELP EALVPPGTWI
NEHVVGKCVS IERCASGVDA RGKGASGDVY RAKVRYADDC AGGELPQLVN VIFGNTSIKE
RVMVRDVELS DAMLGKFAGA RFGAKGLRKL LGVERGPIVM TALKPMGTPS EKLAEMAYAF
AKGGIDIIKD DHGLANQRYA PYEERVRACA AAVKRANAET GRRCIYAPCI NAPAHLVVQR
AKFAKAAGAG AVLMIPGITG LDSMRALAED PDFGLPIIAH PAILGAMLGG GSQNTIRGFA
HGVLLGLLPR LAGADATIFP NFGGRFGFSV EECKDIVHGA RRVLAHHPSI LPSPGGGMTL
DKVKVMMETY GQDVLLLVGG SLYSHSSDLT ANARHILTMA GRTDIYGPRE SQPGSYHVPT
HYSNGLFTPG SGMRPRLKLV DESSSAHSPY PLTPHGTYPA APPSTPWTVG LDPEAVAQMS
ALKEKNYALE SKVDELTTLV KSLMDAEAKR NGTKHASEGP LDGNHSKVLN RKKGEFQWER
VPQEMYKMDG ASFKECSRIE LIGKRGESPV FHVRYFEVAP GGWTTLEHHQ HEHVVVVLRG
EGEIQLGLES YHLGVGDVGY TAPGDTHQLR CKAGTTEPFG FICVVAADRD RPIEDEPYEL
LKMCKMAHVL DENVRVALET QIKHRAEHKA AHGAVAQGSA CEWKPGGKKK AHAAEPSACE
WTPKSKQAPA KPKPTPTRYF P
|
|---|
| |