Gene OSTLU_87970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_87970 
Symbol 
ID5003272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp252750 
End bp253670 
Gene Length921 bp 
Protein Length306 aa 
Translation table 
GC content65% 
IMG OID640418693 
Productpredicted protein 
Protein accessionXP_001419108 
Protein GI145349369 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000586786 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACTTTT CGGGCGACGA AAACGCCGCG CACCGCGCGC CGCGCGCGCG AACGGCGCGC 
GCGAGCGCGC GAGACGGTCG ACGCGCGCAC GCCGCCGATG CGGACGGCGT CGAGCGCGTG
TCGAGCGCGG AGAACGCGAC GGTGAAGCAC TTTGTAAAGT TGTGCAAGAG CAAGGCGTAC
CGGGACGAGC GCGGGACGGT GGTGCTGTCG TCGAGCGTGC TCATGCGCGA GTGCTTCGGG
CGCGCGGGAG AGGGGCGCGA AGCGAAAACG CTGTTCGTCG CGGATTGGGC GGAGGCGCCG
GCGGGAATTC GGGCGAAGAG GGTGATTCGG GCGCCGGCGA GCGTGCTGAA AAAGTGCGCG
GGGGTGAACA ACGCGGACGG GTTGGACGCC GTGGGGGAGT TCGCGTCGCC GGTGATCATG
AACGCGCGCG AGTTCGTCGA TGGTGCGAAA CAGAGGGACG TCGTGCGCGT GCTCGCGGTG
GAGGGGGTGC AAGATCCCGG GAATTTGGGA ACGCTCACGC GCACGGCGGT GGCGTTCGGT
TGGGACACCG TGGCTTTACT TCCGGGAACG TGCGATCCGT TCAACGACAA GGCGATGCGC
GCGGCGCGTG GGGCGACGTT TCGAGTCGAT TTCGTCGCCT TCGATTCGTT CGACGATCTC
GCGAGCGCTG GAAGAGAATT GAACATGGAG TTGTACGCCG CCGAGCCGAG CGCGAAAGAA
GACGTCGACC CCGAACGGGC AAAGGCTGTG GCGAAGGCGT GTCTGGTGCT CGGTACCGAA
GGTCAAGGAT TGAGCGACGA TGCCTTGCGC GCGTGCAAGC CGGTGGCGAT TCCGATGTCG
GGGGAGATGG AAAGCTTAAA CGTCGGCATC GCGGGTGGCG TTCTGATGTA TTTGATGCAG
GCTACTACGA AGACCCGATG A
 
Protein sequence
LHFSGDENAA HRAPRARTAR ASARDGRRAH AADADGVERV SSAENATVKH FVKLCKSKAY 
RDERGTVVLS SSVLMRECFG RAGEGREAKT LFVADWAEAP AGIRAKRVIR APASVLKKCA
GVNNADGLDA VGEFASPVIM NAREFVDGAK QRDVVRVLAV EGVQDPGNLG TLTRTAVAFG
WDTVALLPGT CDPFNDKAMR AARGATFRVD FVAFDSFDDL ASAGRELNME LYAAEPSAKE
DVDPERAKAV AKACLVLGTE GQGLSDDALR ACKPVAIPMS GEMESLNVGI AGGVLMYLMQ
ATTKTR