Gene OSTLU_87902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_87902 
Symbol 
ID5003383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp32615 
End bp33892 
Gene Length1278 bp 
Protein Length425 aa 
Translation table 
GC content60% 
IMG OID640418804 
Productpredicted protein 
Protein accessionXP_001419050 
Protein GI145349249 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0889965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCGC GAGGGAAAAT TTCGGAAGAC GATCAAGATG AAGACGACGG CGACGAAGAA 
GCGGGCGCGG GCGGCGTGGA GGGGTGGCAC GGGGCGTACA AACTTTGGAA ACCAAAACCG
AGGGGGGGCG TCGCGGACGC GGAGGCGGCG AAGCGATTGA AAGTGCGAGA GCTGTTGCTC
AGTCGCGACC CGGGTTTGAA CCAGACGTTG ATATCGTCCG GAACGAGCAT ATCGCAGTTG
TTCGATCAGG ATAAGTGGGA GCGTCATCGC ATGGTGGATC GATTCGTGGT CGATTTGGTG
TCGATTCCCC AGAGCACGGT GTTCTTGCGC TTGTTCAGAC CGTGCGCGGT GCTGGCGGCG
TACACCGCCG TGGTCGTGGC ATTTCCGAGC GTGTTGAAGT ACGCGTGCGC GTATTTCAAT
TTGGCGTTAC CGTTTCCGAA CTTTGCCATG CAGTCTTTGA CGCTGCCGGC GTCGGCGCAC
TCGTTACTGG GCACGCTGTG CGGTTTGGTA CTCGTGTTCC GAACAAACTC TAGCTATGCC
CGCTTCGTAG ACGGACGCAC GGCGTGGGGG TCGCTCATCA AGCACGCGCG TGATGTGGCG
CGCTTGGCGA TATACATTCC CGACAAGAAT CTGCAGAGAC GGTTGCTAGA ACTGACAACG
GCGTACGCGT ACGTGCTGAA GACGCGTTTG AGAAGCGGAC GCACTCGGTC CGATCCCACG
GATCCCACGG CGTTCCGAGA CATTCCCGAC GAAGCCGTCC GTCGATGCGT CACCGACCCC
GCGCTCGCGG ATGAGGTCTT AGCTTCCGCG AAGACGGGAA ATCGGTGCTT GTACACGCTC
ATGCTCATCT CGAAGACGCT CAAGCTGGCG CTCGAGAAGG GGGCGCCGAG AGAAATTCAT
TGGAAGATTG AAGAGGCCGT GAGCGGTATG GGCTTATCTG GAGGTATTTG CGAGCGCATT
GTCGCCACGC CGATCCCCCT GAGCTTCTCG CGTCACTCGG CACGATCGCT CATCATTTGG
CTCATCACGC TCCCGTTCGT GCTCGTCCCG AGCATGTCTT GGATGTCCGT GCCCACCATC
TTCACCTTGG CCTATCTCAT CCTAGGCATC GACGAGATCG GGATCCAAAT CGAAGAACCG
TTCGCCACCT TACCCCTCAC GCCGCTGTGC GCCACGATCG AGCGCGACAT GTCCATCGTC
ATCGCCGATA TCTTCGCGAG CGACGACGCC GATCGCGTCG CTCGCGACGT CGTCGCCGGC
GACGTCGTCG CGCGGTGA
 
Protein sequence
VRARGKISED DQDEDDGDEE AGAGGVEGWH GAYKLWKPKP RGGVADAEAA KRLKVRELLL 
SRDPGLNQTL ISSGTSISQL FDQDKWERHR MVDRFVVDLV SIPQSTVFLR LFRPCAVLAA
YTAVVVAFPS VLKYACAYFN LALPFPNFAM QSLTLPASAH SLLGTLCGLV LVFRTNSSYA
RFVDGRTAWG SLIKHARDVA RLAIYIPDKN LQRRLLELTT AYAYVLKTRL RSGRTRSDPT
DPTAFRDIPD EAVRRCVTDP ALADEVLASA KTGNRCLYTL MLISKTLKLA LEKGAPREIH
WKIEEAVSGM GLSGGICERI VATPIPLSFS RHSARSLIIW LITLPFVLVP SMSWMSVPTI
FTLAYLILGI DEIGIQIEEP FATLPLTPLC ATIERDMSIV IADIFASDDA DRVARDVVAG
DVVAR