Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_5981 |
Symbol | |
ID | 5003117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | + |
Start bp | 564486 |
End bp | 565256 |
Gene Length | 771 bp |
Protein Length | 257 aa |
Translation table | |
GC content | 65% |
IMG OID | 640418538 |
Product | predicted protein |
Protein accession | XP_001419203 |
Protein GI | 145349570 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2123] RNase PH-related exoribonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00562126 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.193352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATCAAACTCG GCCCGCTCGA GGGCGTCTGC GTCGTCCGTC TCGGGCGCAC GATCGCGTGC GCGTCGACGA GCGCGATGTT AGAGCGGCCG CAGAGCGCCG GGGCGTCGTC CGAGGGCGTC CTGCGCGTGG ATTGCGAGTT TTCGAGCGGG GCGTGCGAGG GGTTCGCGCG CGAGGGACGA GCGAATCGAG AGACGCGACA GAGAGCGAAG GATTTGGGCG CGCTGCTCGA GCGCGGGCTG AAGGATGCGC GAGCGGTGGA CGTGGAGTCG CTGTGCGTGC TGGCGGGGAA GCGGGTGTGG GTGGTGACGT GCGCGGTGAC GATTTTGGCG CACGACGGAA ACTTGGCGGG CGCCGCGAGT CTGGCGGCGT GCGGATCGTT GATGACGTAT CGTCGCCCCG AATGCGCGGT CGATCCGAAC ACTGGAACGG TGACCGTGCA CAGCGCGGAC GCGCGAGAGG CGATACCGCT GAATATGCAT CACTTTCCCA TCGCGTCGAC GTATTGCTTC TTCGACGAGG TTCCCGGGTT AGCCGTGGCG GATCCGACGT TGGAGGAGGA AGTCACCGCG GATGCCTCTA TCGTGGTCGT CGTCAACACG CACGATGAAG TCTGCGCGTT GTCTAAGACT GGAAACGGCG TGCCGAGCGA GGACTTGAAG CGATGCGTGC GGAACGCTTC GCGAACGGCG CGCGAGTGGA CCGAACTCCT CAAGGAAGCC GCCGCCGATT TCGAAGCCGA TCGCTTGGCG AATAAAGTGC GCACGCATTA C
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Protein sequence | IKLGPLEGVC VVRLGRTIAC ASTSAMLERP QSAGASSEGV LRVDCEFSSG ACEGFAREGR ANRETRQRAK DLGALLERGL KDARAVDVES LCVLAGKRVW VVTCAVTILA HDGNLAGAAS LAACGSLMTY RRPECAVDPN TGTVTVHSAD AREAIPLNMH HFPIASTYCF FDEVPGLAVA DPTLEEEVTA DASIVVVVNT HDEVCALSKT GNGVPSEDLK RCVRNASRTA REWTELLKEA AADFEADRLA NKVRTHY
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