Gene OSTLU_5981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5981 
Symbol 
ID5003117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp564486 
End bp565256 
Gene Length771 bp 
Protein Length257 aa 
Translation table 
GC content65% 
IMG OID640418538 
Productpredicted protein 
Protein accessionXP_001419203 
Protein GI145349570 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2123] RNase PH-related exoribonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00562126 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.193352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCAAACTCG GCCCGCTCGA GGGCGTCTGC GTCGTCCGTC TCGGGCGCAC GATCGCGTGC 
GCGTCGACGA GCGCGATGTT AGAGCGGCCG CAGAGCGCCG GGGCGTCGTC CGAGGGCGTC
CTGCGCGTGG ATTGCGAGTT TTCGAGCGGG GCGTGCGAGG GGTTCGCGCG CGAGGGACGA
GCGAATCGAG AGACGCGACA GAGAGCGAAG GATTTGGGCG CGCTGCTCGA GCGCGGGCTG
AAGGATGCGC GAGCGGTGGA CGTGGAGTCG CTGTGCGTGC TGGCGGGGAA GCGGGTGTGG
GTGGTGACGT GCGCGGTGAC GATTTTGGCG CACGACGGAA ACTTGGCGGG CGCCGCGAGT
CTGGCGGCGT GCGGATCGTT GATGACGTAT CGTCGCCCCG AATGCGCGGT CGATCCGAAC
ACTGGAACGG TGACCGTGCA CAGCGCGGAC GCGCGAGAGG CGATACCGCT GAATATGCAT
CACTTTCCCA TCGCGTCGAC GTATTGCTTC TTCGACGAGG TTCCCGGGTT AGCCGTGGCG
GATCCGACGT TGGAGGAGGA AGTCACCGCG GATGCCTCTA TCGTGGTCGT CGTCAACACG
CACGATGAAG TCTGCGCGTT GTCTAAGACT GGAAACGGCG TGCCGAGCGA GGACTTGAAG
CGATGCGTGC GGAACGCTTC GCGAACGGCG CGCGAGTGGA CCGAACTCCT CAAGGAAGCC
GCCGCCGATT TCGAAGCCGA TCGCTTGGCG AATAAAGTGC GCACGCATTA C
 
Protein sequence
IKLGPLEGVC VVRLGRTIAC ASTSAMLERP QSAGASSEGV LRVDCEFSSG ACEGFAREGR 
ANRETRQRAK DLGALLERGL KDARAVDVES LCVLAGKRVW VVTCAVTILA HDGNLAGAAS
LAACGSLMTY RRPECAVDPN TGTVTVHSAD AREAIPLNMH HFPIASTYCF FDEVPGLAVA
DPTLEEEVTA DASIVVVVNT HDEVCALSKT GNGVPSEDLK RCVRNASRTA REWTELLKEA
AADFEADRLA NKVRTHY