Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_50173 |
Symbol | |
ID | 5003240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | + |
Start bp | 352112 |
End bp | 353309 |
Gene Length | 1198 bp |
Protein Length | 389 aa |
Translation table | |
GC content | 55% |
IMG OID | 640418661 |
Product | predicted protein |
Protein accession | XP_001419137 |
Protein GI | 145349431 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.828985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAAAAAGGCG CCGAGCGATA TAGCGTCGAT GATTGACGCG CTGGACGATG AGGATGAGCG CGATGGTGGG TCGCAGGCCG GACCGTCGAA GGCGTTGGCG GCGTTCCGGG GCGAAGACGC TAAAGCCAAC CTGCCGGTGT CCATCTTCGG TAGACACGCA AACGCGGCGA CTGGGGCGAA TATCGCGAAG AGATTGGCGA GCGAATGGCC GGAGCCGGAG TGGCGAGCGC CGTGGAAGCT TTATCGTGTG ATTTCGGGAC ACCAAGGGTG GGTGAGATCG TGCGCCGTCG ACCCGGGGAA CGAGTGGTTC GTCACGGGCA GCGCAGATCG CACCATCAAG GTTTGGGACT TGGCGAGTGG CAGCTTGAAG CTCACTTTGA CCGGTCACAT CGAACAAGTC ACCGGTATCG TGGTGAGCCA GAGGCATCCG TACATGTTCT CGTGCGGTTT GGATAAAAAA GTCAAGTGCT GGGACTTGGA GTACAACAAG GTGATTCGTA ACTATCACGG GCACCTTTCG GGAGTGTATT CGATCGCGAT GCACCCGACT TTAGATCTGT TGATGACGGG CGGTCGAGAC AGTGTGTGCA GAGTTTGGGA CATGCGCACA AAGAGACAAG TGTACTGCCT CACTGGACAC GAGAACACCG TTGGATCCAT ATTAGCGCAA GACGAGAATC CGCAGCTCGT CACCGGTTCG TACGACAGCA CGGTTCGCTT GTGGGACTTG GCGACTGGTA AAACGATACA TACACTGACT CATCACAAGA AGGGCGTGCG TGCTATGGCG ATGCACAAGA AGGAATTCGC ATTCGTTTCC GCTTCAGCTG ACAACATTAA AAAATTTTCG TGCCACGGTG ACTTCATGCA CAACATGTTG AGCAAACAGA ATTCCATCGT GAACACGCTG TCTATGAACG ACGATGATGT TGTCTTTAGC GGTGGTGATA ACGGTAGCAT GTGTTTTTGG GACTACAAGT CTGGGCATTG CTTCCAACAA GAAAAGGCGT TGGTGCAACC CGGTTCGTTG GAAGCCGAAT GCGGGATCTA CGCCTCCACT TTTGACGTCA CCGGTTCGCG CTTGATCACG TGCGAGGCCG ACAAAACGAT CAAGATGTGG AAGGAGGACA CCGAGGCTAC GCCTGAGAGT GCGCCGATTC TTCCCTTTGC CCCACCCAAG AATATTCGGC GAAGTTGA
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Protein sequence | MIDALDDEDE RDGGSQAGPS KALAAFRGED AKANLPVSIF GRHANAATGA NIAKRLASEW PEPEWRAPWK LYRVISGHQG WVRSCAVDPG NEWFVTGSAD RTIKVWDLAS GSLKLTLTGH IEQVTGIVVS QRHPYMFSCG LDKKVKCWDL EYNKVIRNYH GHLSGVYSIA MHPTLDLLMT GGRDSVCRVW DMRTKRQVYC LTGHENTVGS ILAQDENPQL VTGSYDSTVR LWDLATGKTI HTLTHHKKGV RAMAMHKKEF AFVSASADNI KKFSCHGDFM HNMLSKQNSI VNTLSMNDDD VVFSGGDNGS MCFWDYKSGH CFQQEKALVQ PGSLEAECGI YASTFDVTGS RLITCEADKT IKMWKEDTEA TPESAPILPF APPKNIRRS
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