Gene OSTLU_42852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42852 
Symbol 
ID5003312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp667521 
End bp668045 
Gene Length525 bp 
Protein Length174 aa 
Translation table 
GC content58% 
IMG OID640418733 
Productpredicted protein 
Protein accessionXP_001419236 
Protein GI145349640 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGG ACCGACTCGA GGTGAAGCAC CGAGATAAGT TCAAGTGCTA TTTTGACATC 
ACCATCGGCG GCGAAGCCGC GGGGCGAGTC ACTATGGAGA TTCGCGGCGA CGTCACGCCC
AAGTGCGGGG AGAACTTCAG GCAGTTGTGC ACCGGTGAGG CTGGATTCGG ATACAAGGGT
TCTCCGTTTC ATCGCGTGAT CCCGGGTTTC ATGTGCCAAG GTGGGGATTT CACCAACCGC
AACGGCACGG GCGGCAAGTC CATCTTCGGC AACAAGTTTG AAGACGAAAA CTTCACCTTG
AAGCACACGG GACCGGGGAT TTTGTCCATG GCGAACGCCG GACCGAACAC GAACGGCTCG
CAGTTTTTCT TGTGCACGGC TGAAACCGCT TGGTTGGACG GTAAGCACAC CGTCTTCGGC
TCCGTCATCG ACGGCATGGA CGTCGTTAAG AAGGTTGAAG CCGTTGGCTC GCAATCCGGC
GCCACGTCCG CGGAAGTTCT CATCGCCGAT TGCGGCGAGC TTTAG
 
Protein sequence
MSLDRLEVKH RDKFKCYFDI TIGGEAAGRV TMEIRGDVTP KCGENFRQLC TGEAGFGYKG 
SPFHRVIPGF MCQGGDFTNR NGTGGKSIFG NKFEDENFTL KHTGPGILSM ANAGPNTNGS
QFFLCTAETA WLDGKHTVFG SVIDGMDVVK KVEAVGSQSG ATSAEVLIAD CGEL