Gene OSTLU_42728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42728 
Symbol 
ID5003150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp666993 
End bp667532 
Gene Length540 bp 
Protein Length180 aa 
Translation table 
GC content62% 
IMG OID640418571 
Productpredicted protein 
Protein accessionXP_001419235 
Protein GI145349638 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.640933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCG TGCGCGCGTA CGCCCGCCCC GCGTCCGCGA GCCGCCGACC AACCCTCGGT 
CGCCAATCCA TCGCCGCGCC GCGTCGTGGT TTCACCGTCT CCGCGCGCGC TTCGGATAAG
ACGGTGGAGA AGGGCGATGC CGTCGCGATT CACTACGTCG GCACGCTCGA GGACGGCACG
ACGTTCGACA GCTCGAGAGA ACGAAACGAA CCGATTAAAT TCACCGTCGG CAGCGGGATG
ATGATCCCTG GGTTCGACAA GGGCGTCCTC GGATTGGCTG TCGGTCAAAG CAAGACGATC
AAATGCGCGC CCGCGGATGC GTACGGGGAG GTGCGACCGG AAAATATCCT CAGAGTGCCG
AAGAAGGACG TCGTGGACGC GGTGGGTGAA GATTTCGTCA AAGTTGGCGA AAAGCTGATG
GTCGGACAAG GCATGCCGGC GGAGATCATC GAGGTGACGG ACAGTGAGGT GGCGCTGGAC
GCCAATCACC CGTTGGCCGG GAAGACGTTG AACTTTGATA TCGAGCTCAT GAGCTTGGAC
 
Protein sequence
MHAVRAYARP ASASRRPTLG RQSIAAPRRG FTVSARASDK TVEKGDAVAI HYVGTLEDGT 
TFDSSRERNE PIKFTVGSGM MIPGFDKGVL GLAVGQSKTI KCAPADAYGE VRPENILRVP
KKDVVDAVGE DFVKVGEKLM VGQGMPAEII EVTDSEVALD ANHPLAGKTL NFDIELMSLD