Gene OSTLU_42708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42708 
Symbol 
ID5003376 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp176755 
End bp177538 
Gene Length784 bp 
Protein Length182 aa 
Translation table 
GC content64% 
IMG OID640418797 
Productpredicted protein 
Protein accessionXP_001419299 
Protein GI145349766 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.051223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.549748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATCA ACGACCACGA CACGTTCACC GGGCTCGCGC CGCTGCACAA AGCCGCGGCG 
GACGGCGATC TCGAAAAAGT GATCGCGCTG CTCGACGACG GCGCGGATGG GAACATCAGG
GCGTGCGGAG AGGTGCGTCC GAAGCGAGGC GCGCGCGACG CGATGGTGGA TGAATTCTTT
GATCGGACGC GGGCGTCGGG TAGGGGCGGA ACGCGTCGCG GGGGGGGAAG AAGGGGGAAT
TCGATGCGAT GGTGGACGGT TGGGGATTGG AGATCGCGGC GCGCGGCGCG GACGCGAGCG
AGACGGAGGC GAGCGATGAC TGACGGACCG CGGTGTGGCG GTTTAACGCG TGCAGAGTAA
TGCAGGGAAG ACGGCGGCGA TGTTTGCCGC GAGCGGTGGA CACGTGGACG TGCTGAAGGC
GATGCAACGC GGGCCGTCGT TGCTCGATCT CACGGCGGAG GACGGCGGGA CGCCGGCGAT
GAGCGCGGCG GCGCACGGAT TCGGCGACGT GCTGCAGTTG ATCATCGATA AGAAGTGCAA
CTTGAACGCG CAGGATGAGG ATGGGTGGAC GGCGCTCATG TACGCCGTGT GCGCGGGGAA
CGTGGAAAAC GTCGCGAGAC TGGTCGCGGC GGGCGCCGAC GTCAAGATTA AAAACAAGGA
TGGCGACGAC GCGAAGAAGC TCGCGACGGG GAAGAACAAG GATAAGCTTC TGGCCGCTTT
GAGGGGTAAA CTTGACTCTA TCGGTGAGGG TAAGGGAGGC AAGAAGGGAT GCGTCATCAT
GTAA
 
Protein sequence
MGINDHDTFT GLAPLHKAAA DGDLEKVIAL LDDGADGNIR ANAGKTAAMF AASGGHVDVL 
KAMQRGPSLL DLTAEDGGTP AMSAAAHGFG DVLQLIIDKK CNLNAQDEDG WTALMYAVCA
GNVENVARLV AAGADVKIKN KDGDDAKKLA TGKNKDKLLA ALRGKLDSIG EGKGGKKGCV
IM