| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_42695 |
|---|
| Symbol | |
|---|
| ID | 5003362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009362 |
|---|
| Strand | + |
|---|
| Start bp | 131168 |
|---|
| End bp | 132916 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640418783 |
|---|
| Product | ABC(ATP-binding) family transporter |
|---|
| Protein accession | XP_001419079 |
|---|
| Protein GI | 145349309 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0547165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0193468 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCG TCGGAGACGT CGACTTGCTC AGCGAGGCGT CGTGCGCGGT CATGCCGGGC
CAAGTCGTTG GGCTCGTCGG TGGGAACGGA TGCGGGAAAT CCACGCTGTT GAAGTGCATC
GCGGGGAAGC GGAGCGTGCA GGATGGGGAG ATTGCGATCT CGAAAGAGCT CGAGGTGGGT
TATTTCGAAC AGACGGCGGT TTCTGGGAGC CAAAAGACGG TGTATCAAGA GGCGCGCGCG
AGGATGGATC GAGTAAACGC CGCGGAGAAG GCACTGCGAG CGGCGGAAGC GGCGTGCGAG
ACAGAGGACG ACAAGGACGC GTGCATGGCG GCGGATGTGC TCATGGATTG CTTGGCTGAG
TTTGACGCCG CGGGCGGGTA CGAGGCGGAG AAGCGCATCG CCGGCGTGTT GGACGGTTTG
GGATTCGCTC GCTCGCAGTG GGATGTGAAG TGCGATGACT TAAGCGGTGG TTGGCAGATG
CGCGTCGCGC TCGCGCGTTT GCTGTTGTCC CCCGCGGGTT CGGGCGAGAA AGGTTTGTTG
CTTCTTGATG AACCGACGAA TCACCTCGAC GAAGCCGCGA AGACATGGCT GGCCACGTGG
ATCAAGGATT CGCCGTGCAC GACGCTCATC GTCAGCCACG AAGCTGAACT TCTCGACGGT
GCGTGCTCGC ACATGGCCGA GGTCCGCGGT AAGGGCCTTC ACTGGTACAC GGGCAACTTC
ACCAAGTTCC TGGAGGATCG CGAAGAGCGA ATCTCAATCG CCAAGGCGAC TTACGAAAAG
CAACTCGCGG AGGAAGCGGA ATTAAAAGAT TTCATTCGCC GTTTCTCCGC GAACGCGAGT
AAATCCACAC AAGCGCAATC GCGTCAAAAG CTTTTGGATA AGCTTCAAAA GGAAATGCGC
AAAACTGTCA GCGCGGCGAC GGCGACCATT TCGGACGGCG CCGCGGGCGA CGCGTCAAAG
ATGAACTTAC GCTTGACCAA GCCGCCGCCT TCAAACCAAG TACAGCTGAA ACTCACGGAT
GGCGTTCTCG GTTACAGCGC TGACGCACCC ATCTTGCGTG GATCCCTCGC GCTCGAGCGT
GAGATGCGAG TCGTCGTCTT GGGCCCTAAC GGCGCCGGAA AGTCGACATT GTTGAAGAGC
ATTTCTGGCA CCATGCCGCT CATCTCGGGC GAACGCGAAA TCACCGACGA TCGCGTCAAG
CTCGGTGTCT TTTCGCAAGA TCTCGCGCAA TACTTGCCGA AGGAAAAGTC TTGCCTCGAA
TACGTTCTCG ATGTCGCGCG CGAAGACGAC CCCGCAACGA TTGAGCAAGT CGGCAGGCAA
GCTTTGGGAG CGCTCGGCAT CACCGGCACG ATGGCTTTGC GAAAAATCGG CAGCCTTTCT
GGTGGCGAGA AAGCTCGCGT CGCTCTCGCC GCGTTCGTTT TGCAACCGCG TAACTGCTTG
CTCCTCGACG AACCTTCCAA TCACTTGGAC GTCGGCGCCG TTCAAGCGTT GACCGACGGT
CTTCGCGGAT GGGACGGGTG CTTATTCGCT GTGTCTCACA ACAAGGCGTT CTGCGAAAGC
CTGAACCCGA CGCACGTGAT TCGCGTGAAG AATGGGCAAT TCCACATGGA GAACTGCTAC
GGCCTGACCG ATGCAGACTT CGAACACGAA GAACAGACCG GCGACGCGAC CGCCATGGCA
AAGTCTGCCG TGACGACGAC AGAAGAGGCG GTCGCAGTTG AAGAAAAAGA ACTCGCCCCG
GCGCGTTAA
|
|---|
| Protein sequence | MLSVGDVDLL SEASCAVMPG QVVGLVGGNG CGKSTLLKCI AGKRSVQDGE IAISKELEVG
YFEQTAVSGS QKTVYQEARA RMDRVNAAEK ALRAAEAACE TEDDKDACMA ADVLMDCLAE
FDAAGGYEAE KRIAGVLDGL GFARSQWDVK CDDLSGGWQM RVALARLLLS PAGSGEKGLL
LLDEPTNHLD EAAKTWLATW IKDSPCTTLI VSHEAELLDG ACSHMAEVRG KGLHWYTGNF
TKFLEDREER ISIAKATYEK QLAEEAELKD FIRRFSANAS KSTQAQSRQK LLDKLQKEMR
KTVSAATATI SDGAAGDASK MNLRLTKPPP SNQVQLKLTD GVLGYSADAP ILRGSLALER
EMRVVVLGPN GAGKSTLLKS ISGTMPLISG EREITDDRVK LGVFSQDLAQ YLPKEKSCLE
YVLDVAREDD PATIEQVGRQ ALGALGITGT MALRKIGSLS GGEKARVALA AFVLQPRNCL
LLDEPSNHLD VGAVQALTDG LRGWDGCLFA VSHNKAFCES LNPTHVIRVK NGQFHMENCY
GLTDADFEHE EQTGDATAMA KSAVTTTEEA VAVEEKELAP AR
|
|---|
| |