| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_42662 |
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| Symbol | |
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| ID | 5003137 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009362 |
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| Strand | - |
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| Start bp | 615767 |
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| End bp | 618580 |
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| Gene Length | 2814 bp |
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| Protein Length | 924 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640418558 |
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| Product | predicted protein |
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| Protein accession | XP_001419436 |
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| Protein GI | 145350050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC CCGGAAAACG ACACGGAGAC CTGCCGAAGA ACTTTGAGCA CCAAAACGTG
GAGGAAAACC TGTACGAGTG GTGGGAGTCG CGCGGATACT TTGCCCCGAA CGATGAGACG
GCCACGGGAC CGCCGTTCGT GATCCCGATG CCGCCACCGA ATGTCACGGG AGCGCTGCAC
ATGGGACACG CGATGTTCGT GACGCTGCAG GACGTGATGA CTCGAAGCGC GCGAATGCGT
GGTCGCAAGA CGCTGTGGCT GCCGGGGACG GACCACGCGG GCATCGCCAC GCAATTGGTC
GTGGAGAGAA AGTTAGAGAG CGAGGGAGTG AAACGAACGG ATATGACGCG CGATGAGTTC
GTGGAGCGAG TGTGGGAGTG GAAGGCCGAG TATGGGGGAC GGATTCAGCA GCAGATTAAG
AGGTTGGGGG CGTCTTGCGA TTGGTCTCGC GAGAGATTTA CGCTCGACGA GGGGTTATCT
GAGAGCGTGC TCGAGGCATT CATCACGCTG CACGATCGCG GTCTCATTTA TAAAGGAACC
TACATGGTGA ACTGGGCGCC GAAGTTGCAA ACCGCGGTGA GTGACTTGGA GGTCGAGTAC
ACCGAAGAGC CGGGGACGTT GTACTTTTTC AAGTACCCGG TCGAGGGCGG CGGCGCGGAC
GACTACCTTC CGGTGGCAAC GACGCGTCCG GAAACGATTC TTGGTGACAC TGCAGTCGCG
GTCAACCCAG AAGACGATCG CTTCAAGCAC ATGATCGGGA AGAGATGCGT CGTGCCCTTC
ACCAACGGTC GCACCGTGCC CATCATCGGC GACTCGTACG TGGACATGGA ATTCGGCACG
GGGGCGTTGA AGATCACGCC GGGACACGAC CCGAATGATT ACGAAATCGG CAAGCGTGTG
GGCTTGGATT TGATCAATAT TATGAACAAA GATGGTTCCA TGAACTCTAA CTGCGGCAAG
TATGCCGGCA TCGATCGCGC GGATTGCCGA AAGCAACTCT GGGCGGATAT GGAGGCGGAA
GGTTTAGCAA TCAAGGCGGA GCCGTATACG AACCGCGTGC CTCGCTCGCA GCGGGGTGGC
GAAATCATCG AACCAATTGT TTCTGAGCAA TGGTTCTGTA AGATGGAAAC CATGGCGGAG
CCCTCGCTGA AGGCTGTGGA GACTGGCGAA CTCACCATCA TCCCGCAGCG TTTTGAGAAA
ATTTACAAGT CTTGGTTGAC GGATATCCGA GATTGGTGCA TCTCGAGACA GCTGTGGTGG
GGTCATCAAA TCCCAGTGTG GTACGTGCAC GATTCTGAAG AAGATCTCGC GCGTGCGAGA
GAGGGGGAAG GTAAAGGCAC GAATAAGCGA TACGTAGTGG CGCGAAATGA CGCCGACGCC
GCAGAAAAAG CGAAGGCGCA ATACGGCGAA AACGTCGTGT TGTACCGTGA AGAAGACGTG
CTCGACACTT GGTTTTCTTC TGGTCTGTGG CCGTTCAGCA CGTGTGGGTG GCCCAACGAA
GAAGCTCCTG ACATGAAAAA TTTCTTTCCG GCGAGCGTGC TTGAGACTGG GCACGATATT
TTATTCTTTT GGGTGGCGCG TATGATCATG ATGTCGTACG GGATGACGGG GAAATTACCC
TTCCACACTG TCTTTCTCCA CGGCCTCGTC CGCGATTCGC AAGGTCGCAA AATGAGCAAA
TCGCTTGGTA ACGTCGTGGA TCCGTTAGGC GTCATCGCTG AGCAAGGCTG CGACGCTTTA
CGATTCACGC TCGCCACCGG CACCACGCCC GGTCAAGACT TGAACTTGAA CCTCGAACGT
TTGGCGTCGA ACAGAAACTT CACCAACAAG ATTTGGAACG CCGGTAAGTT TGTGCTGTAT
AGTATGGAGG ACATGACAGA CGATGAGCGC ATGGCGCTCG TCGACGAAGG TGCTGCGCTT
TGCGCCGATG AAGCGTCAAT TGCCGAGCTT CCGCTCGCCG AGCGTTGGAT CGTGAGCAAA
TTGAACGCGA CGGTGGATCA CGTCACCGCC GCGCAAGACA AGTACGACTT TGGTGAGGCT
GGTAGATCGA CGTACACGTT CTTCTACGAC TCCTTTGCCG ATTGGTTCAT TGAAGGCGCT
AAAAGTCGCA CGTACGGAGA CGATGCCGAC GCCGCGCGAG TCACCAAAGC GGTGACGCTG
TACGTTTTGG ATCAAACGCT TCGATTGCTC CACCCATTCG TGCCGTACGT GACGGAGGAA
GTTTGGCAAG CGCTTCCGCA TCGCGGCGAG GCGTTGATAG GCCAAGACTG GCCCGCGCTT
GAAGCTTACG TGGACAAATC CGCAGTGTCG ACGTTTGAAA ACTTACAATC GATCGTCACG
CGTATTCGCA ACGCGCGCGC CGAGTACTCG GTGGAGCCGG CGAAGCGTAT TCCCGCCGTC
ATCGTAGCGA CGGATGCCGA AGCGAACGCG GCGTACAGCG CCGAGTTGAA TCTTATCGCC
ACGCTCGCGC GTTTAGACGC CGAGCAAACG TCCGTCGCGA GCGCGCCACC CACCGAAGTC
GCGAGCGCGC CGGAGAATTT CGTTCAAATC ATCGTCAACG AAAGCCTGGA GGTGTACTTG
CCGCTCGCGG GTCTCGCGGA TCCGGTTAAA GAAATCGCCC GCCTCACGAA GCAAGAGACA
AAGATGCAAA AGGAAATCGA TGGGCTGGCT GATCGCGTCA ACTCGCCCGC GTTCGTCGAC
AAAGCCCCCG CGGCGGTCGT AGAAAAAGCG CAGAAGGAGT TGAGCGAGTT GCAAGAGCAA
CTCGCCGTCG TTCGATCTCG CATCGAACAA ATGCAGGCGC TCGTCGCCAA GTGA
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| Protein sequence | MPKPGKRHGD LPKNFEHQNV EENLYEWWES RGYFAPNDET ATGPPFVIPM PPPNVTGALH
MGHAMFVTLQ DVMTRSARMR GRKTLWLPGT DHAGIATQLV VERKLESEGV KRTDMTRDEF
VERVWEWKAE YGGRIQQQIK RLGASCDWSR ERFTLDEGLS ESVLEAFITL HDRGLIYKGT
YMVNWAPKLQ TAVSDLEVEY TEEPGTLYFF KYPVEGGGAD DYLPVATTRP ETILGDTAVA
VNPEDDRFKH MIGKRCVVPF TNGRTVPIIG DSYVDMEFGT GALKITPGHD PNDYEIGKRV
GLDLINIMNK DGSMNSNCGK YAGIDRADCR KQLWADMEAE GLAIKAEPYT NRVPRSQRGG
EIIEPIVSEQ WFCKMETMAE PSLKAVETGE LTIIPQRFEK IYKSWLTDIR DWCISRQLWW
GHQIPVWYGE GKGTNKRYVV ARNDADAAEK AKAQYGENVV LYREEDVLDT WFSSGLWPFS
TCGWPNEEAP DMKNFFPASV LETGHDILFF WVARMIMMSY GMTGKLPFHT VFLHGLVRDS
QGRKMSKSLG NVVDPLGVIA EQGCDALRFT LATGTTPGQD LNLNLERLAS NRNFTNKIWN
AGKFVLYSME DMTDDERMAL VDEGAALCAD EASIAELPLA ERWIVSKLNA TVDHVTAAQD
KYDFGEAGRS TYTFFYDSFA DWFIEGAKSR TYGDDADAAR VTKAVTLYVL DQTLRLLHPF
VPYVTEEVWQ ALPHRGEALI GQDWPALEAY VDKSAVSTFE NLQSIVTRIR NARAEYSVEP
AKRIPAVIVA TDAEANAAYS AELNLIATLA RLDAEQTSVA SAPPTEVASA PENFVQIIVN
ESLEVYLPLA GLADPVKEIA RLTKQETKMQ KEIDGLADRV NSPAFVDKAP AAVVEKAQKE
LSELQEQLAV VRSRIEQMQA LVAK
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