Gene OSTLU_42575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42575 
SymbolARP3505 
ID5003403 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp221854 
End bp223455 
Gene Length1602 bp 
Protein Length503 aa 
Translation table 
GC content59% 
IMG OID640418824 
Productpredicted protein 
Protein accessionXP_001419100 
Protein GI145349352 
COG category[Z] Cytoskeleton 
COG ID[COG5277] Actin and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGA AGCGCGGCGC GCGCGACGGC GCGCGCGCGC CCTCGACCGC GGCGGATCGA 
CCGGCGGCGT CGAGCCTGCG CGGGGACGTC ACGGTGGTCG TCGACCTCGG AGGGTCGAGC
CTGAAACTGT GCGTCGCCGA GGACGGCGCG ACGGCGACGC GAAGCGCGCC GAACGCGAGC
GCGCGCGTCA AGGCGAGCGA TGGCGCCGGG TTCGTGACGC TGCGGGGCGA GGAGATCGAT
GGGGTGGTGG ACGTGAACGG ATTGGCGCTG CGACGGCCGT GCGACCGCGG GTACGTCGTG
CACTGGGAGC AACAGCGGGA GATATTAGAC GACGCGCTGC GGCGAACGCT CGGCGTGGAT
CCGACGCGGT GCGATTTGAT CATCACCGAA CCGCCGTTCG CGCTGCCGCG CACGCGAGAG
GCGCTGGATG AGATGGTGTT TGAATATTTT GGGTTTCGGC GGGCGTTGGT GACGACGCCG
GCGAAACTGA CGAAACGATT CGCCGATTTC GTGGACGCGA AGAAACGAGA CGCGAAGGAT
TTGTGCGTCG TCGCGCGATC TGGGGTGGTT TTGGATTGTG GGTTTTCTTT CGCGCACGCG
ACGGCGTTTG TGGATGGGAC CGAGGTGCCG CGCGGGATCA AGCGGTTGAA CCTCGGGGGA
AAGGCGTTGA CGAATTATTT AAAAGAACTC GTTAGCTTTC GACAATGGAA CATGATGGAC
GAAAGCGCGG TGATCGAGGA CGTGAAGGAA AAGATGTGCT ACGTCGCCGA CGATGCTTTG
GCGGAATTGG AGAAGTGCAA GGCGAAGCGA GGTGGAACGG TGAAGCGCGA GTACGTATTG
CCAGACGGAA TACACGTCTT GCGAGGGTTC GTGCGCGAGG ACAGCGCAAA CGTGGACAAG
AAGGATGGTT CAGACGACGA CGAAGAATTA TCGGAATCTG ACGAAGATGA TGACGATTTC
GGTGCTTCAG GGAGGACAAA GAAACGACCG AAGAAGAAGG TGCCGAAGGA AAAGAAAGTT
AAAATTCCCA AAAAGGATGA ACCAGAGCAC CAATTCTTGA CGCTCGTCAA CGAGCGCTTC
ATGGTGCCGG AGGTGCTATT TCATCCGAGC GATATCGGCG GACGGCAGTG TGGGGTAGCG
GAGTTAGTGA CACAGGCAGT GGAAAACGAG GATTTGTCTA ACGAAGCCAT GCGAGCGCTC
GCCTACCTCG ACGTCATTGT CACTGGGGGG TGCTCAAAGT TTCCAAACTT TATGGAACGC
TTTGAGCGCG AATTACGGCC GCTGGTCTCG GAGTCGTACA TGTTGCGCAT CCGGCAAATG
GATGATCCAA TTCAAGCGGC TTGCTTAGGC GGCGTCGATA TCGCGAAGGA TCGGGAATTT
TTCGAGAAAC ATGCGCTCAC GAAGGAGGAG TACCTGGCGA ACAAGACGAG TATTCGCGCC
GCGCACGAGA GTTTGGAATT CGAGCCAAAC GTTCGCACCG GGCGTTTGCG TGAATACGCC
GCGACGCCGA ACCTAAAAAA ACTGGACAAG AAGCGCATCA TCGAGGATTG TGAAAAGCTG
ACGCCTAGTT TCGAGCGGGA CATCATTCAC GCGTCCGCGT GA
 
Protein sequence
MAPKRGARDG ARAPSTAADR PAASSLRGDV TVVVDLGGSS LKLCVAEDGA TATRSAPNAS 
ARVKASDGAG FVTLRGEEID GVVDVNGLAL RRPCDRGYVV HWEQQREILD DALRRTLGVD
PTRCDLIITE PPFALPRTRE ALDEMVFEYF GFRRALVTTP AKLTKRFADF VDAKKRDAKD
LCVVARSGVV LDCGFSFAHA TAFVDGTEVP RGIKRLNLGG KALTNYLKEL VSFRQWNMMD
ESAVIEDVKE KMCYVADDAL AELEKCKAKR GGTVKREYVL PDGIHVLRGF VREDSANKRP
KKKVPKEKKV KIPKKDEPEH QFLTLVNERF MVPEVLFHPS DIGGRQCGVA ELVTQAVENE
DLSNEAMRAL AYLDVIVTGG CSKFPNFMER FERELRPLVS ESYMLRIRQM DDPIQAACLG
GVDIAKDREF FEKHALTKEE YLANKTSIRA AHESLEFEPN VRTGRLREYA ATPNLKKLDK
KRIIEDCEKL TPSFERDIIH ASA