Gene OSTLU_42488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42488 
Symbol 
ID5003447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp433721 
End bp434023 
Gene Length303 bp 
Protein Length100 aa 
Translation table 
GC content65% 
IMG OID640418868 
Productpredicted protein 
Protein accessionXP_001419379 
Protein GI145349929 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.357284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0185281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGA AGGAGACGGT GCTGGACCTC GCGCGGTTCA TCGATCGCGG CGTGCGCGTC 
AAGCTCAGCG GCGGTCGCGA GGTCACGGGG ACGCTCAAAG GGTACGATCA GCTGCTGAAT
CTCGTCCTCG ACGAGGCGAT CGAACATCTC AGGGACGCGG AGGACGCGCT GAAGATCTCG
GACGAGACCA GGGCGCTCGG GCTGTTGGTG TGCAGAGGGA CGAGCGTGAT GGTGGTGTCG
GCGCTGGACT CGATGGAGGA GATCGCGAAC CCGTTCTTGG CGGAGGACGG GGGGGCGATT
TGA
 
Protein sequence
MPPKETVLDL ARFIDRGVRV KLSGGREVTG TLKGYDQLLN LVLDEAIEHL RDAEDALKIS 
DETRALGLLV CRGTSVMVVS ALDSMEEIAN PFLAEDGGAI