Gene OSTLU_42380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42380 
Symbol 
ID5003161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp505759 
End bp507198 
Gene Length1440 bp 
Protein Length479 aa 
Translation table 
GC content56% 
IMG OID640418582 
Productpredicted protein 
Protein accessionXP_001419184 
Protein GI145349529 
COG category[L] Replication, recombination and repair 
COG ID[COG1112] Superfamily I DNA and RNA helicases and helicase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTCA GATGCCGAAC GTCGCCGATT TTGTGCACGT CTGACTCGAA CATCGCGGTT 
GATAACTTGG TCGACGGCTT AGCGAGAGCT GGCGTGCGTG TCGCTAGAAT TGGCCGCCCC
GAAGCGGTTC GTCAAGATCT CATGCCTTAC ATGATCGAAA GTATTGCTGG CATCGATCAA
GACTGTCGAT GGTCCAAGCA GCAGCAGCGC TCCGCCATCA CCAACGCGTT GCGTCAGGCG
GAGGTGATTT GTGCTACTTG CGCCGGTGCT GGGAGCGATA TCTTGGAAAA ATACTCATTC
CAAGCCTGTT TGATCGATGA AGCCACGCAA GCTACAGAGC CAGCGACTGT GATTCCGCTT
ACGAAAGGAT GCAAGCAGGT GGTGTTGATT GGTGATCAGA ACCAGCTACC GCCGACGATC
ATCAGTCGTG AAGCGGAGGC GGCTGGTCTA GGCGAAAGTT TATTCGAGCG TTTCATTCGT
GCGGGCATTC GTACGTACAT GCTGAAGGTA CAGTACCGTA TGCACCCCGC TATCGCGTTG
TTCCCGTCGA AGACTTTTTA CAAAGGCGAG CTTCTGTCTG GTACGCCGCC GAGTCAGCGG
CGAGCGCCCG TCGGTTTCGA CTGGCCGGTT CCCGCCGTAC CTATGGCTTT TGTCAACGTT
GAAGAGGGAG CCGAACGCTC GGATGGGTCT TCGCAAACCA ACCCTGCCGA AATCCAGCGC
GTCGTGAACA TTGTCAAGAA GCTCGCTGGC CAACACGAAG TGTTGCCGGG TGACATTGGC
GTCGTGACTC CTTACAGCGC GCAGGCGCGA GCCATCAAGA AGATTCTTCG CGGTAACGCA
CCGGAGCGCA CACGCTTCGA TGCACCCGCC GATCCAACAT CAATGAAAGC GGTTGAAGTT
GCCACTGTCG ATGGCTTCCA GGGTCGTGAA AAGGAAGTCA TTGTGTTCTC GTGTACTCGA
GCGAACATGA ACGGTAACGT CGGTTTCTTG GCGGATACTC GTCGCGTCAA CGTCATGCTC
ACGCGAGCGA AGCGGGGTCT GATCATCGTC GGGCACATGA AAACCTTACA ACAAGACGAA
ATCGTCTGGA AGGGATGGTT GAAGTGGGCG CGAGAGAGCG GTCTCATCTG CGGCTTGTCC
GCCACCGATT CCGACGCCGC AAACAGACTT GCGTCCATCG GCATGAGCGC GGCGAACGAG
ATTGGTGGCA CTGGCATCGG GCAAACGTAC ATCCAGAACG CTTTGGGCAA GCCCGTGTCT
TGGGCGACAG GGCAGCTGAA GGAGTCCACC TCACAACCGA AGCTTGCAGA GCGCGACGTA
ATTCCGGATG CTTGGGACGA TAGCGACGAC GAAGAAAACA TCAGCACCCA AGGCGTAAAT
ACGATAACTA GCGTTTCATC GATGACGGGG ATGGCCGATG AAGCCTGGGA TTCCGACTAG
 
Protein sequence
MWLRCRTSPI LCTSDSNIAV DNLVDGLARA GVRVARIGRP EAVRQDLMPY MIESIAGIDQ 
DCRWSKQQQR SAITNALRQA EVICATCAGA GSDILEKYSF QACLIDEATQ ATEPATVIPL
TKGCKQVVLI GDQNQLPPTI ISREAEAAGL GESLFERFIR AGIRTYMLKV QYRMHPAIAL
FPSKTFYKGE LLSGTPPSQR RAPVGFDWPV PAVPMAFVNV EEGAERSDGS SQTNPAEIQR
VVNIVKKLAG QHEVLPGDIG VVTPYSAQAR AIKKILRGNA PERTRFDAPA DPTSMKAVEV
ATVDGFQGRE KEVIVFSCTR ANMNGNVGFL ADTRRVNVML TRAKRGLIIV GHMKTLQQDE
IVWKGWLKWA RESGLICGLS ATDSDAANRL ASIGMSAANE IGGTGIGQTY IQNALGKPVS
WATGQLKEST SQPKLAERDV IPDAWDDSDD EENISTQGVN TITSVSSMTG MADEAWDSD