Gene OSTLU_42327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42327 
Symbol 
ID5003462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp360401 
End bp361729 
Gene Length1329 bp 
Protein Length443 aa 
Translation table 
GC content51% 
IMG OID640418883 
Productpredicted protein 
Protein accessionXP_001419139 
Protein GI145349435 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.812568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC ACGAGCGCAG CGCGGCGACG GTGCGGCGTT TGGCCATGTA CAAGCAAAAG 
GCGGTGCGAG ATAAAAAGGG GAAAATTTTA AAGCAAGACT TGCAGAGTAA GGCTTTGCCG
TCGACGCGAA TCGTGCCCGA TCGACGATGG TTCGGGAACA CGCGGGTGAT TGGGCAGAAA
CAGTTGGAGG AGTTTCGAGA GGAGATGGCG ACGAAGAGCC GAGACGGATA CACGGTGCTC
ATTAAACAAA AGAAGCTGCC GCTGTCGTTG CTCAAGGATG AGGAGCGAGG ACGAGCCCGT
CGAGTGAATT TATTGAGTCA GAGCACGTTT GCGGAAACGT TCGGGGCGAA TAAGAGACGG
AAAAAGCCTA AACTGGCGAT GGATAATCTC GAAGCCATGC TTAGCACGGC GTCAAAGATG
GGGGAAGTTT ATCAAGAAGG CGTGGAAACT GGCGCGATTA TGGATAGGGA CTTGATGCGC
GCTGATGACG GTGTGCGAGT GGAAGCTAAG CAGAGCATGT TTGAAAAGGG ACAATCCAAG
CGTATTTGGG GTGAGTTGTA TAAGGTTGTC GATTCTTCGG ACGTCATCAT TCAAGTTTTG
GATGTTCGCG ATCCCATGGG GACGAGGTGC TACCATCTCG AGCAACACTT AAAAAAGGAC
GCGATGAAGC GACATAAGCA CATGATTCTG CTGTTGAACA AAGTTGATTT GGTCCCCGCG
TGGGTCACAA AGCGTTGGTT ACACACGTTG TCGCGTGAGT TCCCCACGAT TGCGTTTCAT
GCGTCAGTGA GTAATCCGTT TGGTAAAGGA GCCGTGTTGT CTCTCCTTCG TCAGTTTAGC
CGTCTTCGAA TGGACAAGCA AAACATCTCT GTGGGTTTTG TGGGGTATCC CAACGTCGGG
AAGTCGTCAG TGATTAACGC ACTGCGTTCT AAACGCGTGT GCCTGACTGC GCCTATTCCG
GGTGAAACCA AGGTTTGGCA GTATGTCAAC CTCACGAAGA GAATTTTCTT GATTGATTGC
CCAGGCGTCG TGTACCAGGA CACTGAAGAC ACCGACACGG ATGCCGTACT CAAGGGTGTA
GTTCGTATAT CCAATCTCGA AGATGCGCAA GAGCATATTC CTGATGTGAT CGCTCGAGTC
AAAGCTGAGT ATTTGCGACG AGCATACAAG ACGCCAAGTT GGACCGATCC TGACGACTTT
CTGCGTCAAG TTGCTCGTAT GAGTGGTAAA TTACTCAAGG GTGGCGAAGA GGACGTAAAC
GCCGTCGCAA AATCTATTTT GCACGATTGG CAACGTGGTC GCATTCCGTG GTTCACGCCG
CCACCTTCT
 
Protein sequence
MNPHERSAAT VRRLAMYKQK AVRDKKGKIL KQDLQSKALP STRIVPDRRW FGNTRVIGQK 
QLEEFREEMA TKSRDGYTVL IKQKKLPLSL LKDEERGRAR RVNLLSQSTF AETFGANKRR
KKPKLAMDNL EAMLSTASKM GEVYQEGVET GAIMDRDLMR ADDGVRVEAK QSMFEKGQSK
RIWGELYKVV DSSDVIIQVL DVRDPMGTRC YHLEQHLKKD AMKRHKHMIL LLNKVDLVPA
WVTKRWLHTL SREFPTIAFH ASVSNPFGKG AVLSLLRQFS RLRMDKQNIS VGFVGYPNVG
KSSVINALRS KRVCLTAPIP GETKVWQYVN LTKRIFLIDC PGVVYQDTED TDTDAVLKGV
VRISNLEDAQ EHIPDVIARV KAEYLRRAYK TPSWTDPDDF LRQVARMSGK LLKGGEEDVN
AVAKSILHDW QRGRIPWFTP PPS