Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_33254 |
Symbol | |
ID | 5003141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | - |
Start bp | 630253 |
End bp | 634503 |
Gene Length | 4251 bp |
Protein Length | 1376 aa |
Translation table | |
GC content | 61% |
IMG OID | 640418562 |
Product | predicted protein |
Protein accession | XP_001419442 |
Protein GI | 145350062 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.218113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GACACCGCGC TCGTCGTCAA AAAAAGTCAG AAAGTTAAGG ATGGCATCGC GCGGTGCCGA ACGCGCGCCA CTGCTCGCGG GCGCGTCGCG CGCCGCCGCC GACGACGTCG AAGGAGGCGC CCAACACCCC GCGATGATCC GGCCGAATCA TCGCTCGAAG GCGTGGACGA CGAAGCTCGC GATAGGCGCG ACGCTCGTCG CCGTCGGCGC GCTCATCGGT GGCCTGACGA CGTCCCGCAA CGGCGCGAGC GGGTCGTCGA CGTCGCTGTC GTCGTGGTTG GCGGGCTTCG CGGCGCCGTC GAGCGCGGAG GCTCGCGAGG GCGCCGGGCG ACCGGGACGC GATGTGAAAA TCACGCTCTT GACGGCGTGT TCGCCGCACG ATATGATTCG AATGAATCCA GGGACGTGGC ATCACAGAGT CGGGGCGAAG GTGACGACGA AGGATCACGA TAACGAGATG GCGTTTAGGA TGGCGCACCA CTTGCGCGAA GATCCGCTCA GGTGCGGGAC GTACACCGGT ACGGTACGAT TGCGCGCGGG TGTGCAGATG AACTTCTGGC TGTATCCGAT CAAGAACGAT GCGAACGAAA CGTTGGTGTA CGATGAACAG TTTGAATTCG CGCAGAGCGA CTCGGGATGC CGCGACGAAG GCAAAGGAGG CGGCGGCGAT CCCAACTGGG ATCGTTGCAG TCCAAAGTTC TCGCCCGCGC CTCTCGCGTT GGTGGGCACC GGTACCAACG ATGGGAATTG CGTGCGGCGA TTCGATGTGT ATTACGACGA ACCCGATCCT GGGCACGAGA CGTTTTTCAA TCGTATTTAC GACGGGCGTC AGACCACTTT CGTGTGGGGG TCGTGCGGGA ACGCGTGCGC CGACTACCAG CCGCCGCAAT GTCCGGTGTG CGCGATCAAC GAGTTCGTGC AAGGACACAG GTGTACGCCG TGTCCGCCCG GTTCGACGCA CTACGCTGGA GCGCAACCCG CGGGCCCGGA CTCACAGTGC GCTCCCATTC GATGCGGTCC GAACGAACTC GTGAAAAATC ACGAGTGCGC GGCGTGCCCG CCCGGCACGA CGAACGATCA AGGCGACAGC TGTATGGAAG CCGATAGTTC CTGCGATCAC ACGTTGTGTG GAATCCATCA AAAAGTTTCC AACCACGTGT GCGTCCCATG CGAACCTGGC AAAGAAAACG CCGCGGGCGA CGACGCGTTC GGCGACGACA CTGAGTGCAC CGACATCGTT TGTGGGTCCA ACCAGTACGT CAGAAACAAC ATCTGCCGAA ACTGTCCAGC GGGAACAACT CGACCGATGG GAGACATCGC GTCGGCGGAA GACACGACGT GTATCCCGAC GTATTGTGGC GAACACGAAC GAGTCTCGTA CCACGTCTGT CGCGCCTGCG CGGCTGGGAC GGAGAACGCT GCGGGCGACG ACGCCTCCGG GCAAAACACT TATTGTGAAG CGATCATGTG CGGAAGTAAC GAACGGGTTC AGAACCACTT GTGCGTCGCG TGTCCGGCCG GTTCAACATC GCCCTCTGGC GCAAACGCCG CCGGTGGCAA CACTGCGTGC ACGCCGACGC TCTGCACCGA ACACATGCGA GTGGTTGGTA ACGCGTGCGT GCCTTGCCCG GCTGGCTCGG AGAACGCCGC GGGTGATGAC GCAACGGGTG ATGACACTAC GTGTGATTAC GGTATATGCG AAGAAAATCA GCATATCAAA AATCACGTCT GCACCGACTG TGCGCCGGGG ACGCATCGAA CCGCTGGCGA TATCACGACG AGCGCCGACA CAACCTGCCC CGCAATCCTC TGCGGCGTCA ATCAAAGAGT CTTAGGCAAC CAATGCGTGG GTTGTCCGCT TGGAACGACG AACGACGCCG GCGACGACGC TTCGGGCAGC GATACCGAGT GCGATCCCAT CATTTGCGGG TTGAATCAGC ACGTCATATC TCACGCGTGC GTCGCGTGCC TTGACGGCTC TGCGAACGAA GCCGGCGATA ACGCCGCTTT AGGCAACACG GATTGCGACG TCCAAATGTG CGGCACGAAT GAAGCCGTGG AGTCAGCCGT GTGTCATAAG TGTCCCGACG ACGCATCTCA CGAAGCTGGA GATTCCCCGA CCGGAGGCGA TACCTCGTGC GATGACCTCT ACTGCCACGT TAACATGAAA GTTCTCAGTG GTGCGTGCGA GGCGTGCCCA CCCGGGACGG TGAACGCCAA TAACGATCCG GTGAGCGGTG GTGATACGAC GTGCGATCCG GTGCTTTGTC CCGTCCACAT GCGAGTTCAA GACAACGCGT GCGTGCCGTG CGACGCTGGC ATGGAAAACG CTGCGGGCGA TGACGCGAGC GGGAAAGACA CGACATGTGA CATCGTGCTC TGCGAAGAAA ACCATCGCGT GTCTGGCGGT GCGTGCGTGC CGTGCGAGCC GGGTGAGTCG AATGAAGCCG GTGACTACAT GCTCGGCGCG GACACCACGT GCGAAGCGAT CCTTTGCGGC GTCAACCAAA AAGTCTCAGG CAATGAATGC GTATCGTGCG AAGCTGGGAC GACGAACGAC GCTCAAGACG ATGCAAGCGG CGATGATACC ACATGCGACC CCGTCGTGTG CATCGCGAAT CAATACGTGA CGGAAAATAC GTGCGCGTCG TGCGCTGCGG GAACGACGGC GCCGCCGGGC TCTCTCGCGA ACGGCGACGA CACGACGTGT GCGGCGACGC TTTGCGCGAC AAACGAACGC GTCGACGAGA ATCACGCGTG TGTACCGTGC GACCCGGGGA TGACCAGCGC CTCCGGCGCC GACGCCAGCG GCGCGCCGAC AACGTGCAAA GCTATTCAGT GCCTCGCCAA TCAGCGCGTG CAAGATCACG CGTGCGTATC GTGCGATCCG GGCTTCACCG TCGCTCCGGG CGGCGACGCC TCGGGTGATG ATACGACGTG TCAGCTCGAC AAGAACGCGG CGTGCCAAAC GAATCAGCAC GTCGTGGACG GCGCGTGCGT CCCCTGCCCC CCGGGAACCA CCAATCGCCC CGGCGACTAT TACACCGGCG AGGACACGAC GTGCGACGCC GTTTTGTGTG GCGCACACGA GTACGTCTCT TCGCACGTGT GCACGCCGTG TGCGTCCGGC CGAGAAGCTC TCGGTGGTGC GGATGCGAGC GGTGATGATA CTGTGTGCGG CGATCCTATT CCCGCCACCG CCACCAAAGT GACGCCGGAA TCGGCGCAGG ACACGTACAC CGCGCCGCTT TCGAAATCCG GGAGTGGCAA GGTGACGATG TCGATCCCCG GCGACCCGGG CGCCCCAGTT GGAGAGTTTT CCCTCATCGC AACGGCGTAC GGCGCCGAAA TCAAACAAGA CGTTCGTCAA GTGTCGTGGT ACGCGTGGAG GGCGGCATCT CGCAGCCTGA ACGTCCACTC TCAGTGGGAC AGGAGCAAAA GTCAACCATG GCTACAAAAC GCGAACGTTG CGTATCTCTT CACCTTGAGC GAGCTCGTCG GCCAAGGAAT CGTAGTGGGT ATGGGCGACC ACAATACCAG GCTCCATAGT CTACCATGGT ACTCGGGCAG TTCGATGAAG ACGCTGCCCG CGACGCAGTC GTACAGCAAA AAAGGCTTGG CGACTGGAGC GCATCCCGTC ATTTTGATCA ACACTTACAC GCCCAACAAC TGGCCGGATA CGTTTGTGTG CAACGTGTTC AAACTCAGCA CGAAAGGTGG GACGTTCAGA GTGCGCGTCG GACGCGCGGA TAGCCACGGT CATGGTTGGG GCGATAACGA CATTCGCGTC GTGTACGCGG CGTTCAAGCC AAACGCCCCG TCGTTGACGA ATGACATTCT CGCCGCCGGC GAGATTCAAC TTCCGAAGCC TCTCCCGATC GGCAAAAAGA CGTTTTCAAA CGTGACGCTC GAGCACAACT TGAACAGGCT CGACTATCAA TGCCTTGCGA CGGTTCGAAT CGACACCGAC AAGGACCCCA CTCGCTCCAT CGCTGTCGAA TGTCAAGCCG GAACCGCGAA CACCATCACC TTTATGGCTG CGGATTTGGA ACTTCGCGCT TGGGACACAT ACGGGCCGGA TGTGTTCGTG TCGTACATGC TCATCCCACT CGTCGGTGCG CCGGTAATTA AACCCGATCA CTTTTCGGGC GTTCCGACGA TCGTCGGTTG AGAGCGCTTT AATTTCAGAG TTTTAATTAC AGACCCTAAA GGTCGAAATC GCGCAGAGCT TCGAGCGCCA GGGCGTAGTC T
|
Protein sequence | MASRGAERAP LLAGASRAAA DDVEGGAQHP AMIRPNHRSK AWTTKLAIGA TLVAVGALIG GLTTSRNGAS GSSTSLSSWL AGFAAPSSAE AREGAGRPGR DVKITLLTAC SPHDMIRMNP GTWHHRVGAK VTTKDHDNEM AFRMAHHLRE DPLRCGTYTG TVRLRAGVQM NFWLYPIKND ANETLVYDEQ FEFAQSDSGC RDEGKGGGGD PNWDRCSPKF SPAPLALVGT GTNDGNCVRR FDVYYDEPDP GHETFFNRIY DGRQTTFVWG SCGNACADYQ PPQCPVCAIN EFVQGHRCTP CPPGSTHYAG AQPAGPDSQC APIRCGPNEL VKNHECAACP PGTTNDQGDS CMEADSSCDH TLCGIHQKVS NHVCVPCEPG KENAAGDDAF GDDTECTDIV CGSNQYVRNN ICRNCPAGTT RPMGDIASAE DTTCIPTYCG EHERVSYHVC RACAAGTENA AGDDASGQNT YCEAIMCGSN ERVQNHLCVA CPAGSTSPSG ANAAGGNTAC TPTLCTEHMR VVGNACVPCP AGSENAAGDD ATGDDTTCDY GICEENQHIK NHVCTDCAPG THRTAGDITT SADTTCPAIL CGVNQRVLGN QCVGCPLGTT NDAGDDASGS DTECDPIICG LNQHVISHAC VACLDGSANE AGDNAALGNT DCDVQMCGTN EAVESAVCHK CPDDASHEAG DSPTGGDTSC DDLYCHVNMK VLSGACEACP PGTVNANNDP VSGGDTTCDP VLCPVHMRVQ DNACVPCDAG MENAAGDDAS GKDTTCDIVL CEENHRVSGG ACVPCEPGES NEAGDYMLGA DTTCEAILCG VNQKVSGNEC VSCEAGTTND AQDDASGDDT TCDPVVCIAN QYVTENTCAS CAAGTTAPPG SLANGDDTTC AATLCATNER VDENHACVPC DPGMTSASGA DASGAPTTCK AIQCLANQRV QDHACVSCDP GFTVAPGGDA SGDDTTCQLD KNAACQTNQH VVDGACVPCP PGTTNRPGDY YTGEDTTCDA VLCGAHEYVS SHVCTPCASG REALGGADAS GDDTVCGDPI PATATKVTPE SAQDTYTAPL SKSGSGKVTM SIPGDPGAPV GEFSLIATAY GAEIKQDVRQ VSWYAWRAAS RSLNVHSQWD RSKSQPWLQN ANVAYLFTLS ELVGQGIVVG MGDHNTRLHS LPWYSGSSMK TLPATQSYSK KGLATGAHPV ILINTYTPNN WPDTFVCNVF KLSTKGGTFR VRVGRADSHG HGWGDNDIRV VYAAFKPNAP SLTNDILAAG EIQLPKPLPI GKKTFSNVTL EHNLNRLDYQ CLATVRIDTD KDPTRSIAVE CQAGTANTIT FMAADLELRA WDTYGPDVFV SYMLIPLVGA PVIKPDHFSG VPTIVG
|
| |