Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_33242 |
Symbol | LCI1 |
ID | 5003134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | + |
Start bp | 611989 |
End bp | 613228 |
Gene Length | 1240 bp |
Protein Length | 334 aa |
Translation table | |
GC content | 67% |
IMG OID | 640418555 |
Product | Conserved hypothetical protein |
Protein accession | XP_001419219 |
Protein GI | 145349604 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.50965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.269335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CCGCGCCGCA GCGCGCGTCC CCGCACACGC GCGCGCGCGA TGCGCACCGC GCCGACGATC GCGTCCGCGT CCGCCGCCGT CGCGCCGACG CGCGCGGCGC GACGCGCGAG CGCGCGACGG GACGCGAACG CGCGCGCGAC GGCGCGACGG CGCGACGCGA CGAGTCGCGC GCGACGCGAC GCGACGACGC GCGCGATGCC GCGCGCGCAG GGCCCGATGC GAGGGCAACA CCCGGTCGCG CCGCACGGCC CGCGATTTCA CGAGTACGGC GGGTTCGACA TCGATCCCGA GCTGCAGCAC AGTCGAGTGT CGTACCTGCG CGAACGCGTC GAGGCGGTGA CGAAGGAGTT CCCGAACGCG ATCGGCATGG ACGATTTCCT GTTCCGAACG GAGGTGATGC TGCGACGATT CGGGTTCACG ACGGATAATT CCATCGCGCT GACGAGCCTG TGTCGGGACG AGATCACGTT TCCGCTGAAG AACGCCATCG ACGACATTTT CGGATATTCG ATGGATTTGG ACGGGTTGGG AGGGATCATC TCCGCGGGGA CCACGGGGTT GGGGGCGGGA TTGAGTCACT CGCCCACCGA TCACTTGACC GGGAAGGAGC GGTACGTGCT GTTCGCCATG CCGCACATCG CGATCGACGC GGAAGGGCGC GTGGGGAGCA TCGTGCGCGC GGGGCGTCGG GGACAGTCGT GCGCGTGCGG GGCGCTCGTG AAGATGCAAC CGATGTTCAA GCAGTACAAA GAGGGCACGC TGGAGATGGG TTTGGACGAG GGCGGACACG ACCCGCTCGA TCCGGAGTTC TCCATCCTCA CCAGGCGCTT GATCACCGCG GTGAACAAGG ATGAAATCCC TGACAAAGGC TTGCCCCTCT CCGACGTCAC GCGTCTCGCC GACCGCGTCA TCCGTCGCGA TCTCGACAAG CTCATCGGCG AGACCGTGGA CGTGACCAAA TCTGATTACG CCGTCGTCAC CGGGATCCAA ATCCACAGCA CCGCCGCGAA CAACCGCACG TGGCATCCAG CCTTAGAATT TATCTCGCCG ACGTCGATGT ACGTCGTCAA GGACGGCGTT CGTCACGACA TGGACGTCCT CGCCATCGAT CCACCGACGC CGCGGCAGCT GTTCCACATC GCCGGCGGCG AAGAGATCGC GGAGCTTCCA TCGCCGAGGC GCTCTTGGCC CGGGCTCTGA CGCCGCGTTC GCCTTCGCGT CTCGCTCGTC CGCGTCGCGT
|
Protein sequence | MPRAQGPMRG QHPVAPHGPR FHEYGGFDID PELQHSRVSY LRERVEAVTK EFPNAIGMDD FLFRTEVMLR RFGFTTDNSI ALTSLCRDEI TFPLKNAIDD IFGYSMDLDG LGGIISAGTT GLGAGLSHSP TDHLTGKERY VLFAMPHIAI DAEGRVGSIV RAGRRGQSCA CGALVKMQPM FKQYKEGTLE MGLDEGGHDP LDPEFSILTR RLITAVNKDE IPDKGLPLSD VTRLADRVIR RDLDKLIGET VDVTKSDYAV VTGIQIHSTA ANNRTWHPAL EFISPTSMYV VKDGVRHDMD VLAIDPPTPR QLFHIAGGEE IAELPSPRRS WPGL
|
| |