Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_33193 |
Symbol | |
ID | 5003170 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | - |
Start bp | 533904 |
End bp | 536686 |
Gene Length | 2783 bp |
Protein Length | 885 aa |
Translation table | |
GC content | 60% |
IMG OID | 640418591 |
Product | predicted protein |
Protein accession | XP_001419413 |
Protein GI | 145350001 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.627765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCTCG CGCACCGCGC GCCCGCCCGC GCGCCCGCGG CGGGCGCGCC GAGCGACAGG GCGCTAGAGT ACACCATCGT CGATCGCTCG TCCGAGGTTC GTCGCCGTCG CGCGCGCGCA CGCCGCGTTC GCGACGCATT CGCGCGCGAC ATTTACGATG AATTTGAAAT CGCGCGTTGA CTTCCGAAAG AAACGAAGGA CTGACGACTT CGCGCGCGCA GGACGCGAAT CATCGCGCGG AGGAGCTTCA CGTGAAACAT GGCGAACGCG CGCGCGGGTG GTACACGGAG AGAAACGCGG GATTTCCGGC GTACGTGACG GCGCGGTTGC GGCGAGCGAG CGACTTGAGG CAGTTACGGT TGCTGTCGCA CGAGTCTAAG ATTGCGATCG CGGCGCACGT GCACGTGACG ACGAAAGATG GACGCGTGAA GAAGTTGGGG ACGTTGAGAT TTGAGAGCAA CGCGGAGTGC GGGTACAAGG CGAGGGAGTT GAAGACGGTG CACGTGAACG TCAAGGAGGC GACGGAGGTG CGGTTGGAAT TTCCGGGATG TCACGAAAAC GCGAGGAACG ATGGACGACA GATTGGATTG ATGGCGCTAA CGCTGATCGG GGAAGTGAGC GAGCGTGATA GCGCGAGTGA GGCGGTGACG GCGCGCACGC CTTTGCTGGG TCATCGAGTG ATGTCGGCGG CTGGGGACGC GACGACGGAG GTGGACGCGT TGACGGCGGA GAAGATTCGA GAGGTGATGG TTCGCAAGGA ACACGCGGTT GATGCGGAAG ATTACGACGA GGCGAAACGT TTGCGTGACG TTATCGCGAA GCTTCGTGAG TTTGGGGTGA AGGTGAAGGT GTTACAGGAA GAAAAAATGC GCGCCGTGGA CGCAGAAGAT TACGACGAGG CGAAACGGTT GAAGATTGAA ATCGACAAGA TGCGATCGAA TGGGTACGAC GATGCGTTCA CCGCGGCGTC TTCGCCGCGT TCGAGCGTGC GGTCACCGAG CTCAAGCGCT CAGGTGACAG AAGAGGTGCG AGTGTTGCCA CCTCTGGGGT CACCTGTAGC CGCGGCGCCG TCGGCGCGAG CCACGTTTTC GTTCGACGAC GTGCCGATTC GTTCGAAACA CGCCGACGCT ATGCGAGATT TGACGGGTGG GAAAGCCGTC GAGCACGACG AAAACGACAT CGAACGATCT ATGAGTGTCG CGAGCAGTGC GCCGAAAGAT CCGCCCCGGC CGAAACCAAT CGAGATTACC AAGTCAAACA CCTTTCGCGA AGACGACGTG AGTGCCGCCG GTATGAGCAA CGACGAGGTC CCCGCGGTGG CCGCTGGCCG TCGTGTGCCT CCTGAGCTCG AGGCTGAAGC AGCCGCGTTT TTCGAACAAG AGCACGAAGA TAAAGTCGTG AGCGCGACGA AGCAATCAGT CAAGTCGAGC GAGGAAGATG ATCTTCCGCC GCTGGCGCCA CTGTCGCCGT CTGAGCAAGT CAACGCGGCG CCCATCATCG AGGCGTTTGG GGAAGATGTC ATCGTCAAGC TCTTCAGCCA AGCATGGTTA CACCGCGAGA CTGCGTTGCA GGCCATCAAC AAGCGACTTA TCGCTGCGTG GGAGAACGCA GACTCCTCTG CCGTGGTCGG AGCGGAGCCT CGCGAGACGT TTCACACGTT GTGCAAGACG CTCGGCGATC GATTATTCAA CGACAAGGTG GCTAACGTGA CGTGTGCGGC AGCGATCACG CTTGCGTCTG CGGCCAAGGC GTACGCTGAG TTCGTTTCCG CCCGGGACGT GCGCGAAGCG GTCGGGGACT CGATGTCGTT ATTAGTCGAT AAACTTGGCG ACACCAATCC TAGACTTCGC GAGAGCATTC GCGAGGCGCT GCACGCCTTC GCAAGCGACG CCCCAGGAGG AGTGAATATC TTAGCGAATG CGCTTTGCAA ACCGGTGCAA AAGTTGAACT TGTGGCGAGT GCTGACTGGA AGGCTCACTC TGCTTCTAGA GCTTGTGCCA ACGTACGGAT TGGATGCGCC AGAAAAGGAA AATTCATTCG CGTTGGAACA AGTCATGAAG TTTGCGACGA AGTGCTTCGA CAGCGCCAAC GGTGAGGCGA GAGGCGTGGC CATGAAGGTT GTTTTGGCGT GCGTAGACAT CGTTGGTTCG AATGTTCGCA CCTACCTTCC GCGAACGCTC AAGAGTGCGA TCAAGGATGT CATTGAAGCG GCGATCGATG AGAACGAAGA CCCGTATGAC ATTCGCGGCA GAAACTCTGG GGCGAGCAAA TCGCCGAGCA AGTCCATGTG GACGGCGTCC AGTCCCGCAT CCACTCGTGG CGGTGTTGTG TTTTCCCCGA GTCGTGGACG CGGTGATGAT TGGAATCAGC CGAGTCCGAG CGTGCCGAGA GACGACATAT CACCCGAGAT GTCCGCCAGC GCGACGACGC TCGAACGCGA AATCACTCGT CGCATCGAGG CGCACGGAGA AGACCACCCA GACGTCGCCG CCGCCATGAA CGATCTAGCC ACACTCTACA GCGAAAACGA GAACTTTGAA CGAGCACAAG CGCTGTTCGA GCGCGCGCTG TCGATTCAAG AGACCACCCT CGGCGCCGAG CATCCCGAGA CGGTGCAGAC GCTCACGGAT CTCGCTATTT GCCACCTCGA CCGCGAGGAC AACAATCTCG GCCGTCCTCT GCTCCAGCGC GCGTTGGAGC TTCAGACGAA TATTTTAGGC CCGGACCATC CCGATGTGGA CGCCATTCGC GATGTTTTAG CCTCGCTCGA CGCTGAGTTG TAA
|
Protein sequence | MPLAHRAPAR APAAGAPSDR ALEYTIVDRS SEDANHRAEE LHVKHGERAR GWYTERNAGF PAYVTARLRR ASDLRQLRLL SHESKIAIAA HVHVTTKDGR VKKLGTLRFE SNAECGYKAR ELKTVHVNVK EATEVRLEFP GCHENARNDG RQIGLMALTL IGEVSERDSA SEAVTARTPL LGHRVMSAAG DATTEVDALT AEKIREVMVR KEHAVDAEDY DEAKRLRDVI AKLREFGVKV KVLQEEKMRA VDAEDYDEAK RLKIEIDKMR SNGYDDAFTA ASSPRSSVRS PSSSAQVTEE VRVLPPLGSP VAAAPSARAT FSFDDVPIRS KHADAMRDLT GGKAVEHDEN DIERSMSVAS SAPKDPPRPK PIEITKSNTF REDDVSAAGM SNDEVPAVAA GRRVPPELEA EAAAFFEQEH EDKVVSATKQ SVKSSEEDDL PPLAPLSPSE QVNAAPIIEA FGEDVIVKLF SQAWLHRETA LQAINKRLIA AWENADSSAV VGAEPRETFH TLCKTLGDRL FNDKVANVTC AAAITLASAA KAYAEFVSAR DVREAVGDSM SLLVDKLGDT NPRLRESIRE ALHAFASDAP GGVNILANAL CKPVQKLNLW RVLTGRLTLL LELVPTYGLD APEKENSFAL EQVMKFATKC FDSANGEARG VAMKVVLACV DIVGSNVRTY LPRTLKSAIK DVIEAAIDEN EDPYDIRGRN SGASKSPSKS MWTASSPAST RGGVVFSPSR GRGDDWNQPS PSVPRDDISP EMSASATTLE REITRRIEAH GEDHPDVAAA MNDLATLYSE NENFERAQAL FERALSIQET TLGAEHPETV QTLTDLAICH LDREDNNLGR PLLQRALELQ TNILGPDHPD VDAIRDVLAS LDAEL
|
| |