| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_32993 |
|---|
| Symbol | HMGB3507 |
|---|
| ID | 5003401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009362 |
|---|
| Strand | + |
|---|
| Start bp | 216219 |
|---|
| End bp | 217291 |
|---|
| Gene Length | 1073 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640418822 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419099 |
|---|
| Protein GI | 145349350 |
|---|
| COG category | [B] Chromatin structure and dynamics |
|---|
| COG ID | [COG5648] Chromatin-associated proteins containing the HMG domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.161398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.121587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGACT CGAAGGTGCG ACGACGACGA CGACGCGAAC GGGTGATTTC GATTTCGGGC
GCGCGCGCCA ACGGCTTTTT AAACCGCGCG GCGAATCGGA CGAATTGGAC GCGGGAGGGG
GCGATCGCGG GCGCGAGACT GACGAAAACG CGGCGAACGC GCGATAGAAT GCGTTGCGGT
TGACGGATGA GAGCTCGCCG GAGCCGCCGA AACGGGCCAT GACGGCGTAT TTGATCTTTT
GCAGCAAGCA TCGCGAGCGA GTGATGCGGG AGGTGCACGG AGACGACGGC GCGCGGAAGT
TTTCGCGAGA CGAAATGCAG TTAGTGACGA CGCGGTTGGC GGAGATGTGG AATAACATTT
CGGAGAAGGA GAAGAAGGAG GTGCAGGCGA AGGCGGCCGC GGCGAAGGCG GAGTATGAGA
TGCAGAAGGC TGCGTTTTCG CCGGCGTTGC TGAAGAAGTT GCATCGGTTG AAGAGCAAAC
CGAAGGGAAC GGTCGTCGTG GAGGCGCAGG GTGAAAAGCC CGTGCGCGCC AAAACGGCGT
ATTTGATCTT CTGTGGTAAG CATCGCGCGG CGGTGATGCG GAAGATTCAT CCGGAACCAG
AGGCCAAGTT TACGCGCGCT GAGATGCAGC AAGTCACCAC GGAGTTGGCT GCGTTGTGGA
ATAACATCTC CCCGCAGGAG CTCGCCGAAT GCAAGGCGGC GGCGGCGAAA GAGCTCGAGC
GATACAAGCA GTTGAAAGCA GAATACCGCC CGCCGGTGTA CGGGCCATCC AAGCGGAACA
AAGGCAAGAG CGTGCCGGGC AAGCCCAAGC GCGCTCCCAC CGCGTACCTC ATCTTTGCCG
AAGAGTTGCG CGCCAGAATC AGACAGGAGC GACCGCATTT GAAGCACGAC GAAATCTCTC
AAAAACTGTC TACGGCCTGG AAGGAGATCG ACGAAGCCTC CAAGAGAATC TTCCAGCAAA
AGGCGGACGC AATCAAGGCG GATCTCATGC AAAACATGCC GAGTTCTGTG ATGCTCACGG
GCCTGGAACA CTCCTTACCG GAGCCACACT ACAATACGCA CATGTACCCC TAA
|
|---|
| Protein sequence | MVDSKNALRL TDESSPEPPK RAMTAYLIFC SKHRERVMRE VHGDDGARKF SRDEMQLVTT
RLAEMWNNIS EKEKKEVQAK AAAAKAEYEM QKAAFSPALL KKLHRLKSKP KGTVVVEAQG
EKPVRAKTAY LIFCGKHRAA VMRKIHPEPE AKFTRAEMQQ VTTELAALWN NISPQELAEC
KAAAAKELER YKQLKAEYRP PVYGPSKRNK GKSVPGKPKR APTAYLIFAE ELRARIRQER
PHLKHDEISQ KLSTAWKEID EASKRIFQQK ADAIKADLMQ NMPSSVMLTG LEHSLPEPHY
NTHMYP
|
|---|
| |