| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_32979 |
|---|
| Symbol | IDS |
|---|
| ID | 5003427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009362 |
|---|
| Strand | - |
|---|
| Start bp | 183933 |
|---|
| End bp | 185075 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640418848 |
|---|
| Product | isopentenyl diphosphate synthase, putative chloroplast precursor; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (ISPH) (LYTB) |
|---|
| Protein accession | XP_001419302 |
|---|
| Protein GI | 145349772 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACG ATGGGATCTC GTACAGCAAG ACTGGGTTGG TGGCGAAGAT GAAGGAGAAC
GGGTTGTCGT ACGTCGAGGA CGGGATCACG TTTAAGCTGG CGGACGCGTA CGGGTTCTGC
TGGGGCGTCG AACGCGCGGT GCAGATGGCG TACGAGGCGA GGAAACAGTT CCCGGAGGCG
AAGCTGTGGA TCACGAATGA AATCATTCAC AACCCGACGG TGAACGACCG GCTGAGCGAG
ATGGGGGTGA ACTTTGTCGA GGAGACGAGC GACGGAAAGG ATTTCAGTGG AGTGAAGCGC
GGAGAGGTGG TTATTTTGCC CGCGTTCGGC GCGAGTGTGC ACGAGATGAA GTTTCTGGCG
GATAAAGGGG CGAACATCGT CGATACGACG TGCCCGTGGG TGAGCAAGGT TTGGAACGCC
GTGGACACGC ACAAGCGAAA GGACTTTACG TCGATCATTC ACGGCAAGTA TAGCCACGAG
GAGACGGTGG CGACGGCGAG TTTCGCGACG ACGTACTTGA TCGTCAAGGA TATGAGGGAA
GCGAACTACG TGCGCGATTA CATTTTGAAG GGCGGCGATA AGGCGGAGTT TATGGAAAAG
TTTAAAAACG CCATGTCCCA AGGCTTCGAC CCCGACGAAG ACCTCGACGG CGTCGGCATC
GCCAACCAGA CCACCATGCT CAAGGGCGAG ACCGAGGCGA TCGGAAAGTT GTTCCAGTCC
ACCATGATGG AAAAATTCGG CGTTGAAAAC GTCGACCAAC ACTTTGTCGT CATGGACACC
ATTTGCGACG CGACGCAAGA GCGTCAAGAC GCCATGTACA AGCTCGTCGA CGCCAAGCCC
GACATCATGC TCGTCGTCGG CGGCTTGAAC TCCTCCAACA CCCAACACTT ACAAGAGATC
AGCGAAGACA AAGCCATTCC GAGCTACTGG GTCGACACCG CCGATCGCTT AAACGCCGAC
ACCAACTCCA TCTCCCACAA GCTCGCCCAC GGCGAGCTCG TCACCACCGA CGGTTGGCTC
CCCGCCGGCG ACGTCGTCAT CGGCATCACC TCGGGCGCGT CCACGCCGGA CAAGGTCGTC
GAGGACGTCA TGGACGTCGT CTTCGCCACC AAGCGCGCCC TCGAGTCCGC CGTCTCGCGT
TAA
|
|---|
| Protein sequence | MANDGISYSK TGLVAKMKEN GLSYVEDGIT FKLADAYGFC WGVERAVQMA YEARKQFPEA
KLWITNEIIH NPTVNDRLSE MGVNFVEETS DGKDFSGVKR GEVVILPAFG ASVHEMKFLA
DKGANIVDTT CPWVSKVWNA VDTHKRKDFT SIIHGKYSHE ETVATASFAT TYLIVKDMRE
ANYVRDYILK GGDKAEFMEK FKNAMSQGFD PDEDLDGVGI ANQTTMLKGE TEAIGKLFQS
TMMEKFGVEN VDQHFVVMDT ICDATQERQD AMYKLVDAKP DIMLVVGGLN SSNTQHLQEI
SEDKAIPSYW VDTADRLNAD TNSISHKLAH GELVTTDGWL PAGDVVIGIT SGASTPDKVV
EDVMDVVFAT KRALESAVSR
|
|---|
| |