Gene OSTLU_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_1871 
Symbol 
ID5003313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp668556 
End bp669836 
Gene Length1281 bp 
Protein Length427 aa 
Translation table 
GC content57% 
IMG OID640418734 
ProductCPA1 family transporter: sodium ion/proton 
Protein accessionXP_001419452 
Protein GI145350082 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGTTGCTCA TGGTGTGCGT CGTCGTGAGC TACGTCATAC AGCGGTATAA CGTGCGCGCG 
GTGCAGCCGA GCGGGGCGGC GCTGATCGTG GGCGTCGCGT TCGGCGCCGT CGCGCGCGCG
AAGACGGCGC GAGGCGCGGA CGTGGCGGCG TTTCAATTTT CGCCGCAGGC GTTCTTTTAT
GGGTTGTTGC CGATCATCAT CTACAGCGCG GGATTGAACC TGAAGCGACG GGATTTCTTC
GCGGATTTTT TCACCATCGC GCTGTTCGCG TTCGTGGGGA CGGTGATCTC GAGCTTCGTG
TTCGGGCTGA GCACGTTCGT GCTGGTGGAG ATTGGCGTGA TTGCGAGGAA ACATCTCGGG
TCGAATCCGT TGTTGGAGTG TCTGTTGTAC GGGACGTTGA TTTCGTCCAC CGATCCCGTG
GCGACGCTGA GCGTTTTTGC GGACGTCTCG GCGCCGCCTT TGTTGTATAA TTTAGTTTTT
GGTGAAAGCG TTTTGAACGA CGCCGTCGCC GTGGTCTTGT TTCGCACGTT GGCGGAGTTT
TACGAGCAAG AGTTTACGGT TTCGACGTTT TGGACCGTCA TAGGGCAATT CATACTCGTT
TCCATCGGAT CGTTGCTCAT CGGGATCGCG ATCGCGCTCG GTACGGCGCT GTTGCTGAAG
ACTTTGGGAT TGGCGGAAGC GCCGCCGAAC GTGGCGGCGT CGTACAACGG CACGGCGTAC
ACGTTTGCGC TGTTGCTCAT CTCGGGGTAC TTTTCGTACG TCTTGGCGGA AAACGTGGGC
ATGAGCGGAA TTATGAGCAT ATTTTTCACG GGTATCGGCA ACGCGCATTA CTCGTACCAT
AACGTCGGCG AAGAGGCCCA AATTGCTGTG TTTAAATCGT TCGAGGCGGC GGCGTTTTTA
TCCGAAACCT TTGTGTTTGC CTATCTCGGC ATGCAAGTCG CGACGTTTGA TCATTTGTGG
GATTTTGGGA TTTTGCTCAC GGGCATCCCT CTCGCCATGG CGGCTCGAGC TGTGAATATA
TTTCCACTCA GTCGTTTGGC GAACACACTG CGAGAGACGC CTATTCCCCG GAACGTTCAA
GTCATGCACG CGGCGTGCGG TTTGCGAGGC GCCGTCGCAT ACGCCTTGGC CGTAAACATG
CCGTCGACGC GACCAGGCGA GCAAGGATCG CGCGCGGTCG AGACCGGGAC GTTGGTGATT
TGCTTAGTTT CTACCCTAGT TCTCGGCGGC GCCACGCTAC CGTTGATGAA ACATCTCGGC
TTGCACGACC CGAGCGACAG A
 
Protein sequence
LLLMVCVVVS YVIQRYNVRA VQPSGAALIV GVAFGAVARA KTARGADVAA FQFSPQAFFY 
GLLPIIIYSA GLNLKRRDFF ADFFTIALFA FVGTVISSFV FGLSTFVLVE IGVIARKHLG
SNPLLECLLY GTLISSTDPV ATLSVFADVS APPLLYNLVF GESVLNDAVA VVLFRTLAEF
YEQEFTVSTF WTVIGQFILV SIGSLLIGIA IALGTALLLK TLGLAEAPPN VAASYNGTAY
TFALLLISGY FSYVLAENVG MSGIMSIFFT GIGNAHYSYH NVGEEAQIAV FKSFEAAAFL
SETFVFAYLG MQVATFDHLW DFGILLTGIP LAMAARAVNI FPLSRLANTL RETPIPRNVQ
VMHAACGLRG AVAYALAVNM PSTRPGEQGS RAVETGTLVI CLVSTLVLGG ATLPLMKHLG
LHDPSDR