Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_16609 |
Symbol | |
ID | 5003103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | + |
Start bp | 688159 |
End bp | 688959 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | |
GC content | 63% |
IMG OID | 640418524 |
Product | predicted protein |
Protein accession | XP_001419245 |
Protein GI | 145349658 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTCCA ACTTTGCGTT CGACGCCGCG GGAAAGGTTG TCGTCGTCAC CGGTGGTGGT CGCGGCATCG GCGCGGGCAT CGTCGACGCG TTCGCGCGAC AACACGGCGC GAAGCGCGTG TACTCGGTGT CGAGGTCGAC GGAGGACACC GTTTTGAAGC CTTCGACGGC GAGCGGGGGC GAGATCGTTG GCGTCTCGGC CGATTTGAGC ACGCCCGATG GCGCGGCAAA AGTTGCGTCG ACGATCGCCG CGCGCGGAGA CGATCTCGTG CACGTGTTGG TGCATAACAG CGGCGCGAGT TGGGGAGCCG AGTTGGAAAG CCACGACGAC AAAGGCTTCG TGAAGACGTA CCAACTAAAC GTCATGGGGA CGTGGCGATT GACTGTTGCG CTCTTGCCCC ATCTCATGAA AGCGGGCACA CCGCAAGATC CCGCGCGCGT CATCGTCATA GGTTCCATAG CCGGCATCCG GCCGCAAAAG TATCCGACGT TTTCGTACGA CGCGAGTAAA GCGGCTTTGC ACCATCTGGC GCTCAAACTC GCGGACGAGT TCGCACGCAA GCGCGCTCTC GATATCACCG TGAATGTCGT CGCTCCTGGA TACATACCCA CCAAAATGAG CGCCGGTCTC ACGAAATATG GTGAATCGAG CGACGACATC GTCGCCTCCA GCGTCCCGCT CCGCCGCGCG GGCGCGCCGG CGGACGTCGC GGGCGCCGTG GCGTTTCTCT CAAGCGACGC CGCGGCCTGG ATCACGGGTG TGGTCTTGCC CGTCGACGGC GGTTTCCTCG CCAAGCTGTA G
|
Protein sequence | MSSNFAFDAA GKVVVVTGGG RGIGAGIVDA FARQHGAKRV YSVSRSTEDT VLKPSTASGG EIVGVSADLS TPDGAAKVAS TIAARGDDLV HVLVHNSGAS WGAELESHDD KGFVKTYQLN VMGTWRLTVA LLPHLMKAGT PQDPARVIVI GSIAGIRPQK YPTFSYDASK AALHHLALKL ADEFARKRAL DITVNVVAPG YIPTKMSAGL TKYGESSDDI VASSVPLRRA GAPADVAGAV AFLSSDAAAW ITGVVLPVDG GFLAKL
|
| |