Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_16584 |
Symbol | SDG3504 |
ID | 5003491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | + |
Start bp | 645079 |
End bp | 646566 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | |
GC content | 59% |
IMG OID | 640418912 |
Product | predicted protein |
Protein accession | XP_001419228 |
Protein GI | 145349623 |
COG category | [R] General function prediction only |
COG ID | [COG5141] PHD zinc finger-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAG TCGTGGGATA CGTGCGACCG ACGGTGCGAA ATAGGTATCG GATGAGCGAG GCTGAGGTGG TCGAACGGCG CCGGCGTGAG GCCATCGAAA ACGCCGGCGC CGACGAGACG CCGAGCATCT TCAGGACGCC CAGCGTCGAA AAGTGCGATG TGTGTGATTC TGTTCGAGAG TTTGACCAAG ATGTGCTCGT GCAGTGCGAT GAGTGCATGA TTTTGGTTCA CATGGGTTGC TACGGCGTCA CGACTGCGCC GACGGGCGGG CGTTGGCTGT GTCGAGCGTG CGAACTCGGC TTGCGCACGC CGCCGCGGTG CGCGCTGTGT CCGAACGTGG GTGGTGCGAT GAAACCAACG TTGTGTGGGA GGTGGTGCCA CGTCGTATGC GCGTTGTGGG CGGAATGCAC GTTCGCGCAT CCTGATGGCG TCGCGGAGCC CATCGAAGGC GTCAACATGG TTCCAGCGGA GAGTTTGAAA GCAACGTGCG CGGTGTGCGA GCAAAGTTAC GGCGCGTGCG CGCAGTGCAT GGGTACGAAA AAGTGTCAAA AAGCGTTTCA CGTGTACTGC GCGAGAGACG CGGAGTGTGG ATACATCGCG CACTCGCGCA CGGTGGCGCA GCTGAAACAG GCGGGCATTC GCAAATTCAT CGTGGGTTAC GAACAGCCTC TGCGAAACAC CGACACACTT TTGTTTCCGA GTTGTCCCGC GTGCGCAAAC TGGCGAGGTC GCAAGCGCAA ACGGCGCGCG TCGACACCGA AGAAGCGAAC TCAGACACCG AAGACAAGGC CAACTGTGGA TTCGCGCGAA GTCGAAGACA AAGACGAAGA CGCGAAACCA CTCCAGTGCG CCAAGTTTGA CCCTTTAGGC GCGTACGCTC GCGCGTTGAC GGTGTCGCCA AAGGATTCGA TACCATATCT CGTCACGGGC GCGCGAACGA GTCGCTTGGA ATCGTTCAGT CTTCGAGCCG TCGCACTTGC CGATCCGCCG CGAAATCTGA ACGAGCGTTT CGAGCGCATG AAGGCGACGA TTTCAGATCG CTTGACGCTG GGGAAATCGT ATATTCACGG CTATGGTTTA TTCGCAAAAC GCGCGCACGC GCGAGGCGAG ATGATCATCG ATTACGTCGG CGAAATCGTG CGTCCAGTCG TTGCCGATAT TCGCGAGCGC GACGTGTACG ACACCTGTTT CGGCAACGGG ACGTACATCT TCGCGCTAGG CGGCGACGAT CAACCCGTGC GCTTAGACGC CACGTGTGCA GGAAATCTCG CAAACTTGGC CAACCATTCG TGCGCACCGA ACGCGCATTC GAGACAAGTG TACGCCGCGA ACGACAACCA CATTTGCTTA TTCGCGTCGC GAAACATCCA GCCCGGCGAG GAAATTTTGT ACGAGTATAG ACTCGGCGCC GATCAGACGT TACGATGCAA CTGCGGCGCC GCAAACTGTC GCGGCGTCGT CAACTTTACC GCCGAGCACC CGGCGTAG
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Protein sequence | MDKVVGYVRP TVRNRYRMSE AEVVERRRRE AIENAGADET PSIFRTPSVE KCDVCDSVRE FDQDVLVQCD ECMILVHMGC YGVTTAPTGG RWLCRACELG LRTPPRCALC PNVGGAMKPT LCGRWCHVVC ALWAECTFAH PDGVAEPIEG VNMVPAESLK ATCAVCEQSY GACAQCMGTK KCQKAFHVYC ARDAECGYIA HSRTVAQLKQ AGIRKFIVGY EQPLRNTDTL LFPSCPACAN WRGRKRKRRA STPKKRTQTP KTRPTVDSRE VEDKDEDAKP LQCAKFDPLG AYARALTVSP KDSIPYLVTG ARTSRLESFS LRAVALADPP RNLNERFERM KATISDRLTL GKSYIHGYGL FAKRAHARGE MIIDYVGEIV RPVVADIRER DVYDTCFGNG TYIFALGGDD QPVRLDATCA GNLANLANHS CAPNAHSRQV YAANDNHICL FASRNIQPGE EILYEYRLGA DQTLRCNCGA ANCRGVVNFT AEHPA
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