Gene OSTLU_87757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_87757 
Symbol 
ID5002647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp340532 
End bp341560 
Gene Length1029 bp 
Protein Length342 aa 
Translation table 
GC content59% 
IMG OID640418068 
Productpredicted protein 
Protein accessionXP_001418906 
Protein GI145348954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00464747 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0099544 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAGACG ACGACACGGC GAAGCGCGTG GACGCGGCGA GCGAGGTGCT GGATAAGATC 
ATACGAGAGA CGGTGGAGGG AATCTTTTTG GAGGAGGCGG CGACGGAGGT GCTGAACGAG
GCGAGCGCGG CGAACGAGCG AGAGGCGGTG GAGAGCGCGG TGGATAAGCG CGCGGTGCTG
CGCGCGGTGG TGCGATCGCA CTTTGAAGAG TTGGATGGAT CGTTTTTGGC CGCGCTGGGG
GCGTACGTGC GGGCGAGTGA GGCGAGCGGG GATTTGCAAT TGGTGTCGCT GTTGAACGCA
ATCAAGGAGG AGACGCTGGC GACGGTGACG GATTCGTTGA CGGATGAGAT GCAGGTCGTG
CAGCTCGTGG CGAGGCTGAA GAGTAATGAA GAGCGGTTTG AAGTCATACG CGTCGCGCAC
GCGGGTGGCG GTCGGGCGTT GGGGGATGTA GACGTTCCGG GGGTGAGCGT GGAAAAAATT
GAACGCGCCG CCGCGCAACT CATCGACGAG CTCGAACTTC AGGAACAGAT TCCTAATTGG
GACCTCCTGT ACCAAGTTAT CGTCGTGCGA GAGACCGCTC GACAGTTGTC GAAAGCTGCG
GACGCCAGTG GGGTGTACAG CGACGTCGTC GTCTCCGGTT CGTTCGCGCC TTCAGAGCTT
CCAAAGGCGG AATCCGCGCT CATCAAGGAA CTCGTCGTGG TTAACACGGT GGCCCAACGG
CGCGCGTTGC TGGCGCAGAT GTTCGACGAA ACGCGAGATA AGCTTGATCA AGACTTCGAT
AGATCGAGCG GTAAAGTCAA ACTGAAGAAG ACGACGCGCG GGTTCCAACC TCGCATCGAA
CGAGCCGCTG CGACGGCGGC TGGGTTGGAC TCGAGAGATT TGCGCCCAGG CCGATTCATA
GATAGCGTGA TTAATTTGCG AGTGAGTCTC CTTCGCGAAG GTGAAGAGTC CACGCCGGTG
GTGACTCGTT TAGGGGAGAT CTACTATGAA ATGTGCGATG TCGTGATGGA GAACGCGAAC
GTTGGCTGA
 
Protein sequence
MEDDDTAKRV DAASEVLDKI IRETVEGIFL EEAATEVLNE ASAANEREAV ESAVDKRAVL 
RAVVRSHFEE LDGSFLAALG AYVRASEASG DLQLVSLLNA IKEETLATVT DSLTDEMQVV
QLVARLKSNE ERFEVIRVAH AGGGRALGDV DVPGVSVEKI ERAAAQLIDE LELQEQIPNW
DLLYQVIVVR ETARQLSKAA DASGVYSDVV VSGSFAPSEL PKAESALIKE LVVVNTVAQR
RALLAQMFDE TRDKLDQDFD RSSGKVKLKK TTRGFQPRIE RAAATAAGLD SRDLRPGRFI
DSVINLRVSL LREGEESTPV VTRLGEIYYE MCDVVMENAN VG