Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_87686 |
Symbol | |
ID | 5003020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | - |
Start bp | 105539 |
End bp | 106747 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | |
GC content | 58% |
IMG OID | 640418441 |
Product | predicted protein |
Protein accession | XP_001418835 |
Protein GI | 145348807 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.230119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCT TTCACGGAAC TTTCATTCGC AACTGCATCG TCACGCACGT CATCGACGGT AAGACCATCC GCGTGCTTCT CAACCCCGAC GGCGGTCAGC AACGCTCGTC CACGGGCGAC GGTTGGGAAG ACTCGCTCGT CGTGGGCAGC GAACCCACGT CTCGCATACC GAGCGACGAG CTCGACGCGT CGAGCGTCGA CCCGACGACG TGGGAGAAAG TGGACGTGCG GTTGATCTAC GTCGACACCG AAGAATCGCT CGATGTGAAG AAGGAGGAGC AAGCGTACAA ACCGATCACG CCGGCGGGCG TGGAGGCGTT CGATTGGCTC AAGAAGCGTC TGGGATCGGC GGCGGATGGT CGATGCGGCG ACGTCGAGGT GGACATCGAA TTCGACACCT GCGAGTTCAT GACTTCGGTG TCTCGCGCGC GCGAGTACTC TCTCGATAAG TACGGACGCG TTCTCGCGTA CGTATATCAC AACGGCAACA GCGTCAACGT GGAAACCGTG CTGGCTGGTC AGTCTCCGTA TTTCACGAAG CACGGCAGAT CGAGACTCTA TCACGGTGAA TTCGCGCTCG CCGAGAAGCT GGCGATTGAG AACATTCGAG GAATCTGGGA CCCAGCCGGA GCGTCTCTCG CATCGTTTGG CATGTTAGAG TACAGCCGGG ACTACCGACG ATTGTTGCCT TGGTGGAGAG AGCGAGAATT GTTCATCGAA GACTGGCGTC ACTGGGGACA TCTCGGGCTG ACGAAGGACA TTCTGAACCC GCGCGACGCG CGAGATTACC AAAAACTTCT AGTCGCCGCG GCTGCGCGCG AAAAGGCGAC AATTTTAGTC GATCTTCAGC CGACGCAATC CAATCTTTAC GACGGCGTCA TGCAGCTCAT CCGATACGAA GGCGGGAAGC AGGGATTGTG CATTTTCGCC GGCACGCGAC GATATCCGTT TAACCTTTGG ATGGACGACG CGAACTCGAT GGAAAGCGGA CGACTTCAGG CTTTACTCCA CGCGCGCTAC TGTCAGAACG CTCGCAACTT TTGCTTCATC ACGGGAAGTC TCTTCATCTT TCACGCTAAA AATCGACCGC AGATGCTTTT GGAATCGTGC GAGCAAGTCA GCGATTTCCC GTTGCGTCCG GATGACATGT CGCAAAAGCT TCGAGGGCAC CACCGCGCGG GCGCCGCCAA GTCCTCGCCC GCGGCGTGA
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Protein sequence | MHSFHGTFIR NCIVTHVIDG KTIRVLLNPD GGQQRSSTGD GWEDSLVVGS EPTSRIPSDE LDASSVDPTT WEKVDVRLIY VDTEESLDVK KEEQAYKPIT PAGVEAFDWL KKRLGSAADG RCGDVEVDIE FDTCEFMTSV SRAREYSLDK YGRVLAYVYH NGNSVNVETV LAGQSPYFTK HGRSRLYHGE FALAEKLAIE NIRGIWDPAG ASLASFGMLE YSRDYRRLLP WWRERELFIE DWRHWGHLGL TKDILNPRDA RDYQKLLVAA AAREKATILV DLQPTQSNLY DGVMQLIRYE GGKQGLCIFA GTRRYPFNLW MDDANSMESG RLQALLHARY CQNARNFCFI TGSLFIFHAK NRPQMLLESC EQVSDFPLRP DDMSQKLRGH HRAGAAKSSP AA
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